| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4740 |
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| Symbol | |
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| ID | 6279109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 842687 |
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| End bp | 843859 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642615822 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001888475 |
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| Protein GI | 187919444 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.146924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.780423 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAA TCGCTCTATC TACCGTCTCG CTTGCACTGC TCAGCGCAAC CGGCGCAGTA
CATGCACAAA GCAGCGTTAC CCTTTACGGC GTCATCGATG AAGCGTTCCA GTTCGTGCAC
AACGCCAATC CCGACGGCAA GAACCTGTAC CAACTGGCCG GCGGCAACCT GCAGGGCAAC
CGCTGGGGCT TGAAAGGCAC GGAAGATCTC GGTGGCGGCC TGAAGGCGAT CTTCCAGTTG
GAAAACGGCT TTGACATCAA CAACGGCCAA CTGAATCAGG GCGGCCGCAT GTTCGGCCGT
CAGGCGTACA TCGGCCTGGC GCATGAAGCT TACGGTACCG TGACGCTTGG CCGTCAATAT
GACCCGCTCG TCGACCTGGT TCAGCCGCTA ACGGCTGACA ACTATTTCGG CAGCACATTC
ACGACTCCGG GCGACGTCGA CAATAACGAC AACAGTTCGC GCACGAATAG CGCGGTCAAG
TACACCTCGC CGACGTGGTC GGGCTTCCAG TTCGAAGGCA TGTACGCGTT CGGCGGCGTG
GCGGGCCAGA CGGGTTCGCA GCAAACGTGG TCCGGTGCGG CAACTTACGC GACGGGTCCG
TTCAGCGTGG CAGCAGGCTA CATCCGCATG AACAACGCCA ACTCGAGCGT CATACGGCCG
AACAACTCCT TCACGAGCAC GTCTGACGGC ACGATCGATT CGATCGTCAA CGGCGCATAC
GCAACGGCGA AGTCGATCGG CATCGCTTCG GTTGCCGTGC AGTTCGTCAC CGGCCCGTTC
ACGGCGAGCG CGCGGTATAG CAATGCGCAA TACAAACCGG ACGGCGCGTC GACGTTCGCC
TCCACCGAGC GCTACAACGT AGCCGGCGGC TATTTAGGCT ACCAGGTGAC ACCGGCCGCA
TTGCTAGGTC TCGGCTATAC CTATACGCAC GGCTCGGGCG ACACGTCCGC ATCGTATAAC
CAGGTTTCGC TGGGCGGAGA CTACAACCTG TCGAAGCGCA CGGACCTCTA CCTGGTCGGT
GCCTGGCAGC GCGCGAGCGG CACGCAGCGC AATCCGCGCA GTTCGCCGCC GCAGCAGTTG
CAACCCGCGG TGGCGTCGGT GGCTGACTAC GGCTTCACGG GAGATTCGCG CACGCAGGAA
ATCGTCAGCC TCGGTATTCG TCATAAGTTC TAG
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| Protein sequence | MKRIALSTVS LALLSATGAV HAQSSVTLYG VIDEAFQFVH NANPDGKNLY QLAGGNLQGN
RWGLKGTEDL GGGLKAIFQL ENGFDINNGQ LNQGGRMFGR QAYIGLAHEA YGTVTLGRQY
DPLVDLVQPL TADNYFGSTF TTPGDVDNND NSSRTNSAVK YTSPTWSGFQ FEGMYAFGGV
AGQTGSQQTW SGAATYATGP FSVAAGYIRM NNANSSVIRP NNSFTSTSDG TIDSIVNGAY
ATAKSIGIAS VAVQFVTGPF TASARYSNAQ YKPDGASTFA STERYNVAGG YLGYQVTPAA
LLGLGYTYTH GSGDTSASYN QVSLGGDYNL SKRTDLYLVG AWQRASGTQR NPRSSPPQQL
QPAVASVADY GFTGDSRTQE IVSLGIRHKF
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