Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4720 |
Symbol | |
ID | 6279969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 819128 |
End bp | 822193 |
Gene Length | 3066 bp |
Protein Length | 1021 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642615803 |
Product | acetoacetyl-CoA synthase |
Protein accession | YP_001888456 |
Protein GI | 187919425 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [COG3319] Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases |
TIGRFAM ID | [TIGR01217] acetoacetyl-CoA synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.622636 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCACG AGAATTTCGT CGGGGCCAGC ATGCGCATGT ATGCGCGCGA ACCCGTATTT CAGAACTTGC CGGAGCGCGT CGCCGGATCA CGCATGTCAC GCTTTACCGC TGCGCTGGAA AACTTCACCG GTGAGCGTTT CGCGGACTAT CCAGAACTGC ATGCTTATTC GACGCGCGAA TTTCGCCGGT TCTGGCAGTG CTTTCTGCAA TGGACGGAGG GAATGGAATG GGGCGGTAAA GCGGAACCGG CCTGCGTCGG CGACGAATGC GAGACCGCTT CCTTCTTTCC AAACGTCGAA CTGAATTACG CCCAAAGCGT TCTTGGATCG AAGATCGCGC CGGACGAGTC GCCGGCACTC ACCGCGCGTT ATGCCGATGG CCGCCGCGAA ACGATGACGC GCGGCGAGCT GCGCGAGCGT GTCGCGCGCC TTGCCTGTTC GCTCAACGAG CTCGGTCTGT GCCCGGGCGA CCGCGCGGTC GCGATAATGC GCAACGACGC GCACGCAATC ATCGCCGCGC TCGCGGTCAC GGCGCTGGGC GCGACGCTCT CCACCGCGGC GCCCGAAACC GGCGTGCAGG CGATCCTCGA CCGCTTCGAG CCGCTCGAGC CGCGCATATT GTTCGCGCAC ACGACGCAGC GCTCATTCGA TACGGCCGGC TCGATCGCTT CGCACGTCGC CGCCGTGGCC GCCGCGTTGC CCACGCTCAC GCACGTCGTC TGCCTGGATG AAACGCCGCT GCCGAGCACG GTGAGCCAGC CTCAGCATTC GCTGCGCGAT CTCATCGTTC AGGGTGACGC CGCGCGCTTC GCATGGCGGC GCTTTCCATT CAATCATCCG CTTTTCATCA TGTTCTCGTC GGGCACGACG GGAAAACCCA AGTGCATCGT GCACGGTGCC GGCGGCACCT TGCTCGAACA TCTGAAAGAG CACCAGTTGC ACAGTGACCT GGGTCCTGGC GACAAGCTGT ACTTTCACAC AAGCTGCTCG TGGATGATGT GGAACTGGCA ATTGTCAGCG TTGGCTTCGG GCGTCGAGAT CGTCACGTAC GACGGACCGG TTTCGGAAGT CGACACGCTT TGGCGGATGG TCGCCGATGA GCGCGTGACC GTGTTCGGCA CGAGTCCGGC CTATCTGAAG ATGTGCGAGG ACGCGGGCCT GAAACCCGGC GAGCAGTTCG GGCTGCACGC GCTGCGCGCG ATGATGTCGA CGGGCGCCGT GCTGTACGAC TCGCAGTTCG AATGGGTGCG CGCCTACGTC AAGCCGCTGC AGCTTCAGTC GATTTCCGGC GGCACCGATA TCATCGGCTG CTTCGTGCTG GGCAATCCGA ATCTGCCGGT CTATGCGGGC GAAGCACAGT GCAGGAGCCT GGGCCTCGAT GTTCAGGCGT GGAACGAGGG CGCGCCCACC TCCATGACCG GCGAGCTGGT TTGCGTCAAT CCGTTTCCGT CGCGCCCGCT CGGCTTCTTC GGGGACGCGG ACGGCTCGCG CTTTCACGCC GCCTATTTCA AGGCGAATCC GGGCGTGTGG ACGCACGGCG ACATCATCGA GTTTTCGGCG CAGGGATCGG CTCGTCTGCA CGGACGCAGC GATGGCGTGC TGAATGTGCG CGGCATCAAC GTGAGCCCCG GCGAGATCTA CCGTATTGTC AGCGGTATTG GCGAGATCAA TCAGTCGATG GTCGTCGCGC AGACCACCCA TGACGCGAGC GGATCGGGCC AGCGTGTCGT GCTGCTGCTC GTGTTGCGGC GGGGCGCGAA GATGAGCGCC GCGCTCGCTT CGCGGGTACG GCGTGAATTG ATGCTGCAGG GTTCGGCGGC GCTTGTGCCG GACGTGATCG CCGAAGTCGA AGCGCTGCCC GTCACGCACA ACGGCAAGGC TTCGGAGGCG GCCGCGCGCG ATGCCGTGAA CGGCTTGCCG GTGCGCAACC TGTCGTCGCT GGCGAACCCC GGATGCGTCG AGAAGATCAG CGCGCATCCC GCGCTTGCCC GCACACGTCG CGAGTTGCCG GAACCGGGTG ACTCGGCCGA GCAGGTCGAA GTCTATCTAT GTGCGCTGTG GGAGCAGCTT TTCAGCTTCT CGCCGGTCAG TCGCGACGAC AACTTCTTCG AACTCGGCGG CCATTCGCTG CTCGCCGCGC AGATGCTCGC CGAAATACGG CTGGCAACCG GCCGAACGCT GCCGCTTGCC ACGCTCATCA TCGCGCCGAC CATTGCGCGG CTCGCGACGG TCATCACAGG CGAGCGAACG CAGGACGCGC ATCCGAACGT CGTGCCGATG CGTGCGGGTC GCGGAAGGCC TGTGTTCATG CTTCACAGCA TCACGGGTTC GGTGATGGAG TGCCTGACGC TGGCCGGCGC GCTGGCCAGC GAGCGGCCTG TGTACGGTTT GCAGGCGCGC GGGCTCGACG GCGACGAGGA GCCGCAGCGA TGCGTCGAGG AAATGGCGAG GGTCTACGTC CGGCAGATGC GCGCGGTGCA GCCGCGCGGT CCGTATGCAC TGGTTGGCTA TTCGTTTGGC GGCCTGGTCG CGTTCGAGAT GGCGCAGCAA CTTGTGGCGG CGGGCGAAAA GATCGAGTTG CTGTGTCTGC TCGATACTTA CGTGGACGAG CGCTATTTGC CGTTGCATGA GTGGCTGTCC TTCCAGTACG AAGTCATGGC GGAGCGCGTG CGGGCATTTC GCGCACTGTC CGCGCGCGGT CGCATGGCCT ATATGAAGGA CAGAGTGTTC GGCGCCGCTG ACCGGATTCG CATGCGACTC GGCAGGATGG CCGCGAGGCC GGCAGCCGAT ACGCAGGGGC TGCCGCCGGT ACTGCGGCAG GTGCGCGAGT CGATGCGCGT CGCGATGGCG ACGTATCGTC CGCGTCGCTA TCTTGGCAGT CCGATCGTCT ACGTGCGCGC GTCCGGCAGG GAAGGCGGGC AGGGCGATCC GCTGCCGGCA TGGCAGCGCG TGGCAAGGAG CGGGCTGCTG GTGAAGACCA TCGATGGCGC CCATACCGAT CTCGTTGTGG AGCCGAACCT GGCGATGGTG GCCGATACGC TCGCGCGCAG GCTGGCCGGC GCGTAG
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Protein sequence | MNHENFVGAS MRMYAREPVF QNLPERVAGS RMSRFTAALE NFTGERFADY PELHAYSTRE FRRFWQCFLQ WTEGMEWGGK AEPACVGDEC ETASFFPNVE LNYAQSVLGS KIAPDESPAL TARYADGRRE TMTRGELRER VARLACSLNE LGLCPGDRAV AIMRNDAHAI IAALAVTALG ATLSTAAPET GVQAILDRFE PLEPRILFAH TTQRSFDTAG SIASHVAAVA AALPTLTHVV CLDETPLPST VSQPQHSLRD LIVQGDAARF AWRRFPFNHP LFIMFSSGTT GKPKCIVHGA GGTLLEHLKE HQLHSDLGPG DKLYFHTSCS WMMWNWQLSA LASGVEIVTY DGPVSEVDTL WRMVADERVT VFGTSPAYLK MCEDAGLKPG EQFGLHALRA MMSTGAVLYD SQFEWVRAYV KPLQLQSISG GTDIIGCFVL GNPNLPVYAG EAQCRSLGLD VQAWNEGAPT SMTGELVCVN PFPSRPLGFF GDADGSRFHA AYFKANPGVW THGDIIEFSA QGSARLHGRS DGVLNVRGIN VSPGEIYRIV SGIGEINQSM VVAQTTHDAS GSGQRVVLLL VLRRGAKMSA ALASRVRREL MLQGSAALVP DVIAEVEALP VTHNGKASEA AARDAVNGLP VRNLSSLANP GCVEKISAHP ALARTRRELP EPGDSAEQVE VYLCALWEQL FSFSPVSRDD NFFELGGHSL LAAQMLAEIR LATGRTLPLA TLIIAPTIAR LATVITGERT QDAHPNVVPM RAGRGRPVFM LHSITGSVME CLTLAGALAS ERPVYGLQAR GLDGDEEPQR CVEEMARVYV RQMRAVQPRG PYALVGYSFG GLVAFEMAQQ LVAAGEKIEL LCLLDTYVDE RYLPLHEWLS FQYEVMAERV RAFRALSARG RMAYMKDRVF GAADRIRMRL GRMAARPAAD TQGLPPVLRQ VRESMRVAMA TYRPRRYLGS PIVYVRASGR EGGQGDPLPA WQRVARSGLL VKTIDGAHTD LVVEPNLAMV ADTLARRLAG A
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