Gene Bphyt_4678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4678 
Symbol 
ID6279438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp774648 
End bp775379 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content65% 
IMG OID642615764 
Productprotein of unknown function DUF899 thioredoxin family protein 
Protein accessionYP_001888417 
Protein GI187919386 
COG category[S] Function unknown 
COG ID[COG4312] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACG TATTTGCATC TGCACAAACG TTGAAGCCGG CCCGCCAACT GGCGGCCGGC 
ACACCGAGCC GCTTTCCCGG CGAAAGCGCC GACTATCGCC TTGCGCGCAA CGAACTGCTC
GCCGAGGAAA TCGAGTTGCG ACGCCATATC GAACGGGTCG CCGAACAGCG CCGCGCGCTG
CCACCCGGCG GCGTCGTGCC GGAAGATTAT CTTTTCATGG GCGAAGCAGG CCCGGTGAAG
CTATCGGACA TGTTCGGCGA ACACGACACG CTCGTCACCT ACAACTGGAT GTTCGGCCCG
CAGCGCGCCC GGCCGTGTCC AATGTGCACG TCGCTGCTGA GCGCATACGA CGGCGAAATG
CCTGACATGC TGCAGCGCGT GGCGTTTGCC ATCATCGCGC GCTCGCCGAT CGAGAAGCTG
GTGGCGTTCA AGCAGGAGCG CGGCTGGCGG CATCTGCGGC TGTATTCGTC GGGCGGCAAC
ACGTTCAATC GCGACTACGC GGCGGAAGAT CCGGCCGGCG ACGACAACCC CGCGTTCAAC
GTGTTCACGC GCTCGGGCGG CACGGTGCGG CACTTCTGGG CAGAGGAGAT GGGACCATCG
ACCGCGGACC CCGGGCAGGA TCCACGCGGC GCGCCGGACG TGATGCCCAT CTGGACCGTG
CTCGATATGA CGCCGGGCGG ACGCGGTACG GACTGGTACC CGAAACTCGA ATACGGAAAC
GCGGCGCGTT AA
 
Protein sequence
MNDVFASAQT LKPARQLAAG TPSRFPGESA DYRLARNELL AEEIELRRHI ERVAEQRRAL 
PPGGVVPEDY LFMGEAGPVK LSDMFGEHDT LVTYNWMFGP QRARPCPMCT SLLSAYDGEM
PDMLQRVAFA IIARSPIEKL VAFKQERGWR HLRLYSSGGN TFNRDYAAED PAGDDNPAFN
VFTRSGGTVR HFWAEEMGPS TADPGQDPRG APDVMPIWTV LDMTPGGRGT DWYPKLEYGN
AAR