| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4637 |
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| Symbol | |
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| ID | 6278734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 723217 |
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| End bp | 724410 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642615724 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001888377 |
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| Protein GI | 187919346 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.546229 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC AATGGATTGC CGCCCCCCTG TTGATGTCGT TCGCCGGCAT TGCGTCCGCG
CAGAGCGCCG TCGTGCTGTA CGGCATCGTG GATGCCGGCG TTTCGTACCG CAGCAACGAG
CGCACCGGCA CCACTGGAAA CTATAGCGGC CACTCGAACG TCGCCGCGAC GAGCGGCAAC
CTCTCCGGAA GCCGCTGGGG CATCAAGGGT CAGGAGGACC TGGGCGGCGG CTGGAACGCA
TTGTTCCAGC TCGAGGACGG CTTCGATATC ACGAACGGCA AGACCGGCCA GAACGGCGGC
CTGTTCGGCC GCCAGGCGTA CGTGGGCGTC GGCAGCAAGC AGTACGGCAC GATCACGCTG
GGCCGCCAGT ACACCTCGCT GAACGACTTC GTTTCGCCTG TCGCGCCGGT GGCGATGGTC
GGCGGTTACG GCGCGCATCC GGGCGATATC GACGATCTGG ATCAGACCGC GCGCGTCAAC
AACTCCATCA AGTACACGAG CGCGAACTAT GCGGGCTTCA CGTTCGGCGC GCTGTACGGT
TTCGGTGGCC AGCCCGGCAG CCTGAAGCAG CAGAATACCT GGAGCGTGGG TGCCGCCTAC
GGCAACGGCC CGTTGCATGT GGGCGTCGGC TTCGAACGCT CCGACAACAG CAAGACCGGT
GCGCGGGACA CGACTTACGG CAAGTGGAAC GGTACGGACG ACGGTCTGTT CAATTCATCC
ATCAACGAAG GCTACGCGAG CGCGCAATCG CAACAGATCA TCGCGACGGG CGCGACGTAC
AACTTCGGGC CGGCGATCGT CGGCGTGAAT TACAGCAACG TGCAGTATCG CTCCGGCGCG
GACTCGCTGT TCAAGGGACA CGCCACGTTC AATATCGCGG GCGTGTTCGG ACAATGGACG
ATCCGTCCCG CCGTGCAACT GTTCGCGGGC TACAGCTACA CGCGTGGCGG CGAAGTGGAT
GGCGTGGATG AGCGCGCGCA GTATCACAAC GTGACGCTCG GCGGGCAGTA TGCGCTGTCC
AAGCGTTCGA CTGTCTATCT GATGGGTGGT TACCAGCACG CGTCGGGCGG CACGCTGGAT
GCGCTCGGCA ATCCGGTCGC GGCTACCGCA TCGGTTAGCG ACAAGGGTAA TGGCCACTCG
TCGGCGGCGC AGTCGCAGGC CATTGTCAGC ATCGGTGTGC GGCATAAGTT TTAA
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| Protein sequence | MKKQWIAAPL LMSFAGIASA QSAVVLYGIV DAGVSYRSNE RTGTTGNYSG HSNVAATSGN
LSGSRWGIKG QEDLGGGWNA LFQLEDGFDI TNGKTGQNGG LFGRQAYVGV GSKQYGTITL
GRQYTSLNDF VSPVAPVAMV GGYGAHPGDI DDLDQTARVN NSIKYTSANY AGFTFGALYG
FGGQPGSLKQ QNTWSVGAAY GNGPLHVGVG FERSDNSKTG ARDTTYGKWN GTDDGLFNSS
INEGYASAQS QQIIATGATY NFGPAIVGVN YSNVQYRSGA DSLFKGHATF NIAGVFGQWT
IRPAVQLFAG YSYTRGGEVD GVDERAQYHN VTLGGQYALS KRSTVYLMGG YQHASGGTLD
ALGNPVAATA SVSDKGNGHS SAAQSQAIVS IGVRHKF
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