| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4623 |
|---|
| Symbol | |
|---|
| ID | 6278142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 706467 |
|---|
| End bp | 707822 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642615711 |
|---|
| Product | von Willebrand factor type A |
|---|
| Protein accession | YP_001888364 |
|---|
| Protein GI | 187919333 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4655] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.422892 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAA AAGCGAAAAC AAAAGCGGCA TTCAGAAGGC GGCAGAGAGG ATCGGTCAGC
ATTTTCGTGG CGGTGTCGCT GATCGCCTTG TTGGGCATCC TCGGCCTCGC GGTGGATTCC
GGTTTCGGCT ATATGATCAA GGCGCGTCTG GACGCCGCCA CCGATGGCGC AGTGATCGCG
GCCGGCGAAG CAGTCACGCG CGGTAACAAC CAGACGGAGC AGACCAATAA CGCACAGCAG
GCCGCAACGG CGTTTTTCGC GGCGAACTAT CCGGCGGGTT TTCTCGGCTC GAGCGTGAGC
GCGGGTACGC CGTCGATCGT GTTCAACGCC GGCACGGTGA CGATCGGCAT GACCGCGCAG
GCGAGCGTGC CGGTTACGTT CTCGAAAGTA CTTGGATTCA ATGTGCTGAA CGTGAGTTCG
TCTTCGCAGG CGATTCGCAA GACGCTGGAT ATGGTGTTTG TGATCGATAA CACCAAGTCG
CTTAACACGT CTGGCGTGCC GGCTGCGGTG CGCTCGAATG CGGTGGCGTT TCTCAATAAT
TTCGACGTGA CGAATGACCG CGTCGCGCTG ATGCACTTCG CGTACGGCAC GGTGGTGGAT
GTACCGTTCA AGGGCAACAC GCGTGGTTTC GATCGCGCAA CGATGACCAC GGATATCAAC
AAGTACACGT TCGACGGCAG CACCAACTCC CCGGAGGCAC TGTGGAACGC GCGCAACCAG
TTGAACACGG TAATTACACA ACCTTCGAGC CTGCGCGTCA TCGTGTTCTT CTCGGATGGC
GCACCGAATA GCTTCTCGTC GTTTTTTACG ACCAACCAGA GCAAGTGCAA CAACATCTCC
ACCACGCTCG CGAGCGGCGA TGGTCCAAGC GGTTCCGCCT CCGGACTATT CAGCATCAAT
GCCCTGAGTC AGAAGCTGGC GTCGCCGTGT TATCAGAACG ATACGTCGGG CTTCGTGACC
GCCATGCCGA AGTGGTACAA CGCTCACAAC GTCAACGAGC AGACCTTCCC GATCTGGCCC
GTGACCTCGC CGCGCGTGGT GTCGAACGGC AATGCGACGT ATGTGAACGT CAACCGCGTA
TCGCGCAATC TGCTCGAAGC GATGGCCGCA GCGGCGCGTG CCGAAGGCAC CTACGTGTTC
ACACTCGGCT ACGGCAATGA GCTGACCAAG CCCGCCGGTC CGGACAACGA GCTCGGCCAG
GACGTGCTCA AGTGCATGGC CAACACGGCG GATTCGCTAT CGCGATGCTA CAACCCAAAA
CAGCCGGTCG GCGTGTATTG CTACGCCGCG ACACCAGCCG ATCTGAAGCC GTGCTTTTCG
CAGCTGGCTT CGCAAATCCT GCGTATTTCC AAGTGA
|
|---|
| Protein sequence | MKTKAKTKAA FRRRQRGSVS IFVAVSLIAL LGILGLAVDS GFGYMIKARL DAATDGAVIA
AGEAVTRGNN QTEQTNNAQQ AATAFFAANY PAGFLGSSVS AGTPSIVFNA GTVTIGMTAQ
ASVPVTFSKV LGFNVLNVSS SSQAIRKTLD MVFVIDNTKS LNTSGVPAAV RSNAVAFLNN
FDVTNDRVAL MHFAYGTVVD VPFKGNTRGF DRATMTTDIN KYTFDGSTNS PEALWNARNQ
LNTVITQPSS LRVIVFFSDG APNSFSSFFT TNQSKCNNIS TTLASGDGPS GSASGLFSIN
ALSQKLASPC YQNDTSGFVT AMPKWYNAHN VNEQTFPIWP VTSPRVVSNG NATYVNVNRV
SRNLLEAMAA AARAEGTYVF TLGYGNELTK PAGPDNELGQ DVLKCMANTA DSLSRCYNPK
QPVGVYCYAA TPADLKPCFS QLASQILRIS K
|
|---|
| |