Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4582 |
Symbol | |
ID | 6278120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 661389 |
End bp | 662162 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642615672 |
Product | YcgR family protein |
Protein accession | YP_001888325 |
Protein GI | 187919294 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5581] Predicted glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000154259 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGCCG ATCTCTCGCT GGATGCCGAC GTCGCCGAAC AAACTCAACA AACCTTGGGC GCCGACTCAA ACTTCGCGCA GCGCCATCCC TTGCAAATTG CCGTGTGTCT GCGCCAACTG GTGGCCGGAC AGGACTTCGT CACGGTCGAA TTCGGTGGCC GGCAAATCGT CACGCAGATA CTCGATGTCG ACTCGCGCAA TGCGCGCTTC GTCTTCGATG CCGGCAGCGT GGCCGATGAC AACGATGCAT TGCCATCTGC CCGGCAATTG ACGTTCCGCA GCCTGCCCGG CGGCATTCGC ACCGAGTTCA CGACGTTCGA TGCCACGCCG ACTCAGTTCG ATGGACTGCC GGCTTTCGAA GCGCCCTTGC CTACCGTGCT CCACTACGTT CAACGCCGCG AGTTCTTCCG CGTGCAAACG CCCGTGCTCG ACCCGTACAT CGCCAGCGGC CGGTATGCGG ATGGCGGCTC GTTCCGCCTG GAGTTGCTGG ACCTGTCGCT GGGCGGCATC GCGTTGAAGA CCGCCGACGA ACGCTTCGGC TCGCTCGAAC GCGGCACGGT GCTGCGCGAC GTCGCATTGC AACTCGGCGG CTTCGGCATG CTGCGACTCG ATCTGGAAAT CGTCGCGCCC CGGCAGGTGA GCACGGCGAA GGGCGATCGA CGCTTTGTGA TCGGTTGCAA GTTCGTCGCG ACGCCGGGCC CTGCCGAGCG CACCTTGCAA CGCGTGGTCA CGCAACTCGA AACGAGGCGG CAAGCGCTCA CGCCGCGCCG TTGA
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Protein sequence | MIADLSLDAD VAEQTQQTLG ADSNFAQRHP LQIAVCLRQL VAGQDFVTVE FGGRQIVTQI LDVDSRNARF VFDAGSVADD NDALPSARQL TFRSLPGGIR TEFTTFDATP TQFDGLPAFE APLPTVLHYV QRREFFRVQT PVLDPYIASG RYADGGSFRL ELLDLSLGGI ALKTADERFG SLERGTVLRD VALQLGGFGM LRLDLEIVAP RQVSTAKGDR RFVIGCKFVA TPGPAERTLQ RVVTQLETRR QALTPRR
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