| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4578 |
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| Symbol | |
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| ID | 6280210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 656785 |
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| End bp | 658011 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642615668 |
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| Product | ROK family protein |
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| Protein accession | YP_001888321 |
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| Protein GI | 187919290 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.104261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACCA CCGGCACCCG CTCGCCCCTC AAACGCACGG TCGGCTCGAA TCAGGTCGGC
ATGCGGCAGT TCAACGAACG CATCGTGTTG CAAGCGATCC GCTTGCATGG GCCGCTGCCG
AAAGCCGACG TGGGCCGCCT CACGCGTCTT TCGATGCAGA CCGTGTCGAT GATCGTCGAG
CGTCTCATCG AAGACGGCCT GCTCGAAAAG CAGGCTCGCG TGCGCGGCAG GATCGGCCAG
CCGTCCGTGC CGATCGCGTT GCGCGCGCAG GGCGCGTACA CCATCGGCAT CAAGGTGGGA
CGCCGCAGTC TCGACGTGCT GGCGATGGAT TTTGCCGGCC ACGTGGTGCA CCGCGATGTC
TTCGACTACG CGTATCCCGA TCCACGCACG CTGTTTCCCG CGCTCGAAAA CAAACTCGCG
CGCGTGAATC AGACACTCGG CGCGAAGGCC AGCCAGGTGG TCGGCGTGGG CGTCGCGGCG
CCTTTATGGC TCGGCGGCTG GCGAGACTTT CTCGGCGCGC CGCCCGACGC GCTGGAAGCG
TGGAACGAGA TCGATCTGCG CTCGCGCATC GGCACCATGA CGGGCCTGCC CGTCGAGTTC
GCCAAAGACA CCACGGCTGC CTGCGCCGCC GAACTGGTGA TGGGCCAGGG GCGCGGCATC
CACAATTTTC TGTATCTGTT CGTCGGCACG TTTATCGGCG GCGGGCTCGT GATCGACGGC
CGTCTGCACG GCGGCCCGCA CGACAACGCG GGTGCGGTCG GCTCGATTCC GTTGCGCGAA
GGCGGCGCGC GCAAACCCGC GCGCCAGCTG TTGCACGCGG CGTCGGGCTT CGTGCTCGAA
AAGCTGTTGA CCGATGCGGG CGCGCCGGCT GCGGCCGCGC ACGATCATCG CGCACTGTCG
CCCGAACTGT GGCGGCACAC CGAGCAATGG CTCGACAGCG CGTGCCCCGC GATCGCCACT
GCGTTGACCA ATGCAGCCGC CCTGCTCGAT CTCGACGCGA TCGTGATCGA CGGCGAACTC
GACCGGCAAC TGTTGCGCGA AATCATTCGC CGCACCGAGC GCGTGCTCGA TCGCTTCGAA
TGGGAAGGCA TGGTGCGTCC GCAATTACTG GAAGGCGCGA TCGGCGCCGA TGCGCGCGCG
ATGGGCGGCG CGATTCTGCC GCTCTATGCG CATTTCGCGC CGGTGCATGA GCTGTTCCTG
AAGCCGGCGG CGGAGACGGT TTATTAG
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| Protein sequence | METTGTRSPL KRTVGSNQVG MRQFNERIVL QAIRLHGPLP KADVGRLTRL SMQTVSMIVE
RLIEDGLLEK QARVRGRIGQ PSVPIALRAQ GAYTIGIKVG RRSLDVLAMD FAGHVVHRDV
FDYAYPDPRT LFPALENKLA RVNQTLGAKA SQVVGVGVAA PLWLGGWRDF LGAPPDALEA
WNEIDLRSRI GTMTGLPVEF AKDTTAACAA ELVMGQGRGI HNFLYLFVGT FIGGGLVIDG
RLHGGPHDNA GAVGSIPLRE GGARKPARQL LHAASGFVLE KLLTDAGAPA AAAHDHRALS
PELWRHTEQW LDSACPAIAT ALTNAAALLD LDAIVIDGEL DRQLLREIIR RTERVLDRFE
WEGMVRPQLL EGAIGADARA MGGAILPLYA HFAPVHELFL KPAAETVY
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