| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4532 |
|---|
| Symbol | |
|---|
| ID | 6277573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 606467 |
|---|
| End bp | 607471 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642615622 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_001888275 |
|---|
| Protein GI | 187919244 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGGC TTCAGGCCAT GCAAGTGTTC ACTCGTGTCG TCGACACCAA CAGCTTTACC
CGCGCGGCGG AAACGCTCGA CCTGCCGCGC GCATCGGTTA CCACGATTAT TCAGAACCTC
GAAGCGTTCC TCGGTACGCG TCTGATGCAT CGGACCACGC GCCGTTTGTC GCTCACGCCC
GACGGCGCGG CGTACTACGA GCGCTGCGTG CGCATTCTCG CGGACGTCGA AGAGACCGAG
GCCAGTTTTC AAAGCGGCAA TAAAAAGCCG CACGGCAAGC TGCGCATCGA CATGCCGGGG
TCGATCGGCC GCTTGCTGGT GATTCCTTCG CTGTGTGAAT TCCACACGCG CTATCCGGAC
ATCGACCTGC AACTCGGCCT GACGGACCGG CCGGTTGACC TGCTGCAGGA AGGCGTGGAT
TGCGTGGTGC GGGTCGGCGC GCTACAGGAT TCCTCGCTGG TGGCGCGCCG GATCGGTTTG
TTCGAGGGCG TGACCTGCGC GGCCCCCGAC TACATCGAGC GCGCGGGCAT GCCGACGTCG
CTCGAAGACC TGGAGAATCA CAAAGCAGTC AATTACTTCT CGAGCCGCAC GGGTCGCACG
CTCGATTGGG CCTTCCTGGT TGATGGCAAA GAAATCGAAG TGAAAATGAA GAGCATCGTC
TCGGTGAACG ACGCGGACGC CTACGTGACT TGCGGATTGG AAGGCTTCGG CCTGATTCAG
CCTGCGCTCT TCATGGTGCT GCCGCATCTG CGGTCGGGCC AACTGGTCGA AGTACTGCCA
GAACTGAAGC CTTTGCCGAT GCCAATTTCG GCAGTCTATC CGCACAGTCG GCATCTGTCG
CCTAAAGTCC GCGTTTTCGT AGACTGGATC GCGGAGCTGT TCGACCGTTG TCCGTTATTG
AGTGGACGTG GCAGTCTGGA CGCAACGTGC ACGAAACGCA CTTTCGAAGA ACGCGAGTCT
GCTCCAATGC TCGATACGCC CGTGATAACT GAATGGGTCG CATAA
|
|---|
| Protein sequence | MDRLQAMQVF TRVVDTNSFT RAAETLDLPR ASVTTIIQNL EAFLGTRLMH RTTRRLSLTP
DGAAYYERCV RILADVEETE ASFQSGNKKP HGKLRIDMPG SIGRLLVIPS LCEFHTRYPD
IDLQLGLTDR PVDLLQEGVD CVVRVGALQD SSLVARRIGL FEGVTCAAPD YIERAGMPTS
LEDLENHKAV NYFSSRTGRT LDWAFLVDGK EIEVKMKSIV SVNDADAYVT CGLEGFGLIQ
PALFMVLPHL RSGQLVEVLP ELKPLPMPIS AVYPHSRHLS PKVRVFVDWI AELFDRCPLL
SGRGSLDATC TKRTFEERES APMLDTPVIT EWVA
|
|---|
| |