Gene Bphyt_4525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4525 
Symbol 
ID6280134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp595452 
End bp596486 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content62% 
IMG OID642615615 
Productzinc carboxypeptidase-related protein 
Protein accessionYP_001888268 
Protein GI187919237 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.988976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCTC TGAGCTTCCT TCCCGATAGT TTTGCGGAGT ACGAAGATCT CAGAACGATC 
CTCGAGCAGG GCAGCGCGAG CTTCGCGATC CGCACGGTCT GTGAGACGAC GGTGCGCGGC
CGGCAATTCG CCGTGCAGAC CGCGAGCATC GGTTCGACCG ACCCGCAAGC GCCGGCAATC
GGTTTTTTCG GCGGGATACA CGGGCTCGAG CGGATCGGCT CGCAACTGGT GCTCGACTAT
ATGCGCGCGC TGCTTGCGCG GCTCGAATGG GACGAGCTGC TGGTGCGCCA ATTGCAGTCG
ATTCGTCTGA TCTTTATGCC GATTGTCAAT CCCGGCGGCA TGTGGGCGGC CACGCGCGCC
AACCCCAACG GCGTCGACCT GATGCGTAAT GCGCCGCAGA ACGCCGACGA ACGTGTGCCG
TTACTGGCGG GCGGCCAGCG CGTGGGTGCA TGGCTGCCGT GGTATCGGGG CCGCGTGGGC
GCGCCAATGG AGCCCGAGGC TTCGGCGCTC CTGCAAGTGG TCGAAACCGA ACTGGCCACG
CGACCGTTGA GCATCGCGCT CGATTGCCAC TCGGGCTATG GCTGGAGCGA CAGCATCTGG
TTTCCATACG CACGCACCCG CAAAGTGATG CCGCATTTGC CGGAAATGTA CGTGCTGAAA
ACCATGTTCG AACGCGCGCA TCCCCATCAT GGCTACGCGT TCGAACCGCA GAGCCATCAA
TATTTATTGC ACGGCGATCT GTGGGACTTC GCGTACGATC GCGCGCCCGC GCCCAACGTC
TTTCTGCCGA TGACCCTCGA ACTCGGCTCC TGGCTTTGGA TCAAGAAGAA TCCGCGTCAG
TTGTTTTCGC GTCAGGGCAT GTTCAATCCG GTGAAGGCGC ATCGCACGGC GCGTGTGCTG
CGACGTCATG CAAATTTGCT CGACTTTCTG GCGCGCGCGG CCTTTTCGTC GCAGCGCTGG
CTGCCGCAAG GCAATCGTCG CGAGCAATTG CTGCAAAGCG CGATCGACCA TTGGTATAAA
CCGGAAAGCG TATGA
 
Protein sequence
MQPLSFLPDS FAEYEDLRTI LEQGSASFAI RTVCETTVRG RQFAVQTASI GSTDPQAPAI 
GFFGGIHGLE RIGSQLVLDY MRALLARLEW DELLVRQLQS IRLIFMPIVN PGGMWAATRA
NPNGVDLMRN APQNADERVP LLAGGQRVGA WLPWYRGRVG APMEPEASAL LQVVETELAT
RPLSIALDCH SGYGWSDSIW FPYARTRKVM PHLPEMYVLK TMFERAHPHH GYAFEPQSHQ
YLLHGDLWDF AYDRAPAPNV FLPMTLELGS WLWIKKNPRQ LFSRQGMFNP VKAHRTARVL
RRHANLLDFL ARAAFSSQRW LPQGNRREQL LQSAIDHWYK PESV