Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4503 |
Symbol | |
ID | 6278302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 571955 |
End bp | 572629 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642615593 |
Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
Protein accession | YP_001888246 |
Protein GI | 187919215 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAATCC AGACCTCTTT CCTCTTCGAT CTCGACGGGA CGCTGGTCGA CAGCGTCTAC CAGCACGTGC TGGCCTGGAA AGAAGCGCTC GACAGCGAAG GCATTCCCTT GTCGGTCTGG CGAATTCACC GCAAGATCGG CATGAGCGGC GGGCTCTTCA CCAATCAGCT TTTGCGGGAA ACGCACGGCG AGATCAACGC CGACCGGGTC GAGCGTCTCC GTCAAGCTCA CGCCGCAGCC TATCAGCGGT TGCGCGCACA GGTGTGTCCG CTGCCGGGCG CGCGTGCGCT GCTCGACGCG CTGACGCAAG CCGGAACGCC TTGGGCCGTG GCGACGAGCG GCCGCATGGA GACGGCGGCG CTCAATCTGG AGGCCCTCGG GGTCGATCCG GCGAAGGCCG TGGTCGTCAC GCGCGACGAC GTCAAATATG CAAAGCCGGA TCCGGATCTG TTCATCGCCG CCGCCGGGCG GCTCGGCGTA CCGGTCGAAC ACACGGTGGT GGTCGGCGAC AGCATCTGGG ACATGCTCGC GGCGCGGCGC TGCCGGGCGC TGGGCGTGGG TTTGCTGTCG GGCGGATACG GCACGGAGGA ACTCGAGCGC GCCGGCGCGC TGCGGGTCTA CGACGATCCG GCGGATCTGC TGGATCATCT GGACGAGGTG GCGTCGCGCC CGTAA
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Protein sequence | MRIQTSFLFD LDGTLVDSVY QHVLAWKEAL DSEGIPLSVW RIHRKIGMSG GLFTNQLLRE THGEINADRV ERLRQAHAAA YQRLRAQVCP LPGARALLDA LTQAGTPWAV ATSGRMETAA LNLEALGVDP AKAVVVTRDD VKYAKPDPDL FIAAAGRLGV PVEHTVVVGD SIWDMLAARR CRALGVGLLS GGYGTEELER AGALRVYDDP ADLLDHLDEV ASRP
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