| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4485 |
|---|
| Symbol | |
|---|
| ID | 6277560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 555132 |
|---|
| End bp | 555779 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642615576 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001888229 |
|---|
| Protein GI | 187919198 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1360] Flagellar motor protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.593276 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.69449 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGG ACATCGACGG CGGCGTGGAG CAGGTCGCGC CGATCTGGCC GGTTTTCGGC
GACCTGATGT CGGTGCTGCT GGGCGCTTTC GTGCTGATCC TCGTGGGCGT GATCGGCGTG
CAACTGGAGT TGTCGAGCAA GCTGGAGCAG GAGGTCAAGC AGCGTCAACT GGAAACCCAG
CGCCGCAAGA CGCTGGAGCA GGCGCTGGCG GGTCCGCTCG CGGCTGGGCG CGTGACGCTC
GTGAACGGGC GCATCGGCAT CAGCGGCAAT GTGCTGTTCG CGCTGAACTC GGATCAGTTG
CAGCCGCAGG GCCGTGATCT GCTGAAGAGT CTGGCCGGCC CGCTCTCCGC GTATCTCGGC
GCGAACGACG AAATCTTGAT GGTGAGCGGC TTTACCGACG ACCAGCGTCT GCGCGAAGGC
AACCGCCGTT TCGCCGACAA CTGGGAATTG TCGGCGCAGC GCGCGCTGAC GGTGACGCGC
GCGCTGATCG ACGACGGCGT GCCCGCGTCG TCGCTGTTTG CGGCTGCGTT CGGCTCCGGT
CAGCCTGTCA GCTCGAATAC CGACGAGCAG GGACGCGCCA AAAACCGGCG CGTGGAAATA
GCACCGGTGC CTCGGCCATC GACTGCAGCG GTGAAGCCAC GTGAGTGA
|
|---|
| Protein sequence | MSEDIDGGVE QVAPIWPVFG DLMSVLLGAF VLILVGVIGV QLELSSKLEQ EVKQRQLETQ
RRKTLEQALA GPLAAGRVTL VNGRIGISGN VLFALNSDQL QPQGRDLLKS LAGPLSAYLG
ANDEILMVSG FTDDQRLREG NRRFADNWEL SAQRALTVTR ALIDDGVPAS SLFAAAFGSG
QPVSSNTDEQ GRAKNRRVEI APVPRPSTAA VKPRE
|
|---|
| |