| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4476 |
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| Symbol | |
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| ID | 6278269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 545599 |
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| End bp | 546246 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642615569 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_001888222 |
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| Protein GI | 187919191 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACG CCTCACCCGC TATCGCCCGC CTGATTCTCG TCGACGATCA TCCGCTCGTG
CGCGACGGTT TGCGCGCGCG GCTCGAAGCG GTGCGCCACC TCGAAGTGGT CGGCGAAGCC
GGCAATGCGC AGGAAGCGCT CGCCCTCGCC GCGAGCGCGG AGCCTCATCT CGTGCTGATG
GATGTCGGCA TGAACGGAAT GAACGGCATC GCGCTGGCCG GCATGTTTCA CGAACGCTTC
CCGGCGATTC GCGTGCTCAT GCTGTCGATG CACGACAATC TCGAGTACGT GACCCAGGCA
GTGCGCGCGG GTGCGAGCGG CTACGTGCTG AAGGATTCGC CTTCCACCGA GATCATCCAG
GCAATTGGCG CGGTGCTCGA AGGCAAACAG TTTTTCAGCG CGGGACTTGG CGCGCGTCTG
ATTCAGGCTT CGGCTATGCA GTCGCCCGTC GAACGGCTCA CGCCGCGCGA GCGCGACATT
CTCGATGCGC TTGCGGAAGG CTTGTCGAGC AAACAGATCG CTCAGCGCAA CGATCTCTCC
GTGCGGACGG TGGAAACGCA TCGGCTGAAT CTGAAGCGCA AGCTCGATAT TGAAGGTCAG
GCCGAATTGA TCAAGTTCGC GGTGGAGAAC CGGCGCACGA ACCGGTGA
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| Protein sequence | MNDASPAIAR LILVDDHPLV RDGLRARLEA VRHLEVVGEA GNAQEALALA ASAEPHLVLM
DVGMNGMNGI ALAGMFHERF PAIRVLMLSM HDNLEYVTQA VRAGASGYVL KDSPSTEIIQ
AIGAVLEGKQ FFSAGLGARL IQASAMQSPV ERLTPRERDI LDALAEGLSS KQIAQRNDLS
VRTVETHRLN LKRKLDIEGQ AELIKFAVEN RRTNR
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