| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4448 |
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| Symbol | |
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| ID | 6279604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 515963 |
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| End bp | 517294 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642615541 |
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| Product | ribonuclease BN |
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| Protein accession | YP_001888194 |
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| Protein GI | 187919163 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0111149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCG ACACGCTTTC CGCCGAGAAC CTCCAGCAGG TGGCCCGCAA GCAGGCCAAC
TGGGCCATCG GCGCCTTCAA ACAGTTTGCC GAAAACCGCT GCGCGGCCAT GGCCGCCAGC
ATCGCGTTCT ATGCGGCGTT TTCACTCGCG CCCACGCTGG TGATGGTGAT CGCCGTGGCC
GGCTGGTTCT TCGGCGCCGA GGCCGCGCGT GGCGAGTTGT TCAATCACAT CCACGGATTG
CTCGGCGACC AGGCCGCCGC GGGCGTCCAG ACCATCGTCG AGAACGCGCA TCACAGCGGC
AGCGCCGGCG GTATTGCTGC AGTGATTTCG CTCGTGACGC TGGTAATCGG CGCCTCTGCG
ACATTTTCGT CGCTCAATAG CGCACTCAAT ATCGTCTGGC CCAATACCGG GCCGCGTTCG
TCGAGCGTGA TCGCGCTGGT ACGCGTGCGT CTGATTTCAT TTGGACTGGT GCTGGGCGTC
GCGTTCCTGC TGATCGTGTC GCTGGTGCTC GATACGGTGA TCACCTTCGT CGGCAAATGG
CTCTGGGGCG ACTCCCCGTA TATCGTGATC GGCAATCTTC TCCAACTCGG CGTCGGCTTG
CTCGTGCTGG CGTTCGCCTT CGCCGGCTTG CTCAAGTTTC TGCCGGATGC CCGCGTGCGC
TGGCGAGATG CGTTCGTCGG CGGGATAGTC GCGGCCGTGC TGTTTTCGGC GGGCAAGAAG
CTGTTCGCGC TGTATCTCGC GCACGCCGGC ATGGCCACCT CGTTCGGCGC GGCCGGTTCG
CTCGCCGTGT TGCTGATGTG GCTTTACTTC TCCGCCGCCG TGCTGCTGCT CGGCGCGGAA
TTCTCGGCGG CGCGCGGGCG CATGCACGAT CCGCGCGGCG GCTGGGGCAT GCAGAACGAC
ACGCCGCCCG GCAGCCGCGC CAAGCTTGCG TCTGTACTGG CGGCATCGAC CGTTGCCGCG
GATGCGGTGC CGCACGCCGA CGCGCAAGCG AACGGACGCG CCGCGTCGGA CGACGCCACG
CGCAGCCCCG CCTTGCGCGC CGCGAAAGCC GTAGCGCTCG ACGGCGCGGC GCCGCCGGCA
ACGTTCCGGG CGCGAGCCGA AAACAGGCCG TCGGCGCGGG CGACGGCGCT CAAGGTCGGC
CGTACGGTCG TGCTCGCCGA AGCGCAAGCG ACGCGCATCG CCGCCGTCAC GCTGATCGAA
GCAAGCCGCA AGGCCGTTGC GGCCGACCGC TACGTGAGGC GGCATCCGTG GACTTCGGTG
CTCTTCGCGG CGACCGCCGG ACTCGCTGCA GCGATGGTCA CGCGCCGCCA TACCGGCAAC
AACGAACGCT AA
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| Protein sequence | MDIDTLSAEN LQQVARKQAN WAIGAFKQFA ENRCAAMAAS IAFYAAFSLA PTLVMVIAVA
GWFFGAEAAR GELFNHIHGL LGDQAAAGVQ TIVENAHHSG SAGGIAAVIS LVTLVIGASA
TFSSLNSALN IVWPNTGPRS SSVIALVRVR LISFGLVLGV AFLLIVSLVL DTVITFVGKW
LWGDSPYIVI GNLLQLGVGL LVLAFAFAGL LKFLPDARVR WRDAFVGGIV AAVLFSAGKK
LFALYLAHAG MATSFGAAGS LAVLLMWLYF SAAVLLLGAE FSAARGRMHD PRGGWGMQND
TPPGSRAKLA SVLAASTVAA DAVPHADAQA NGRAASDDAT RSPALRAAKA VALDGAAPPA
TFRARAENRP SARATALKVG RTVVLAEAQA TRIAAVTLIE ASRKAVAADR YVRRHPWTSV
LFAATAGLAA AMVTRRHTGN NER
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