| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4433 |
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| Symbol | |
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| ID | 6277866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 496195 |
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| End bp | 497784 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642615526 |
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| Product | outer membrane porin |
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| Protein accession | YP_001888179 |
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| Protein GI | 187919148 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.326641 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGATA CCCGATCAAA AAACCGGTCA AAAAAAACCG GAGCAGCAAC GTTCTTTTAC
TGCGCATTCA CGCTTCCCGC ACTGACATTG GCTGCAAACG CGTATGCCGA CGACGGCGTC
ACGGAGCCCA CCTCCGAGGC GTCTAAAACT CAAACGGTCG CGCAAACGTT GTCGTCCCCC
GCGCAACTCG CACAGACCGC GCAGCCCACA ACCACGCAGC AAAACAACTC GTCCAGCAAG
CGTCGCGCTG AACAAGGCGG CCAGGTGCGT AACGACCAGC CCGACACCAC GAACGCCATC
GTCAACGCAG AGGCCAGCCA GACAGTCACG CCGCCCGCGC CGCCGTCGAG CCAGGCGGCG
AGCAAGGGTT TTATCGCGGA CAGCCATCTG AATCTGCAGT TTCGCAACTA CTCCGACTAC
TTCCAGGCAC CCAACACGAT CTACCGTCAC GCGTGGGTCC AAGGCGCGCA GGCCAACTTT
GAATCCGGCT ACACGCAAGG ACTGATCGGC TTCGGCATCG ATGCGTCGCT GTTCGGCGCG
CTCAAGCTCG ACGGCGGCAA CGGCGCGGGC AACATGGTGC ACGTGGGCAA GGACGGCGGC
GGTTCGCAGC AACTCGCGTG GGCGTATCCC GGCATGTACG ACATCAAAGG ACGCATTTCG
GAAACAGTCG TGAAGTACGG CTTGCAGGAC GTGACGAACC CGTTCCTCGA ACCGCACGAC
AACCGCGCGT TGCCGCCGAC CTTCCTCGGC GTCTCGATGG TCAGCAACGA TCTCGCGCAC
ACTGAGCTTC AGGCCGGCAG CTTCACCAAA GTCGACGCGC GCGGCCACAC CAACCTGACC
AATCTCACCA CCTCGTACGG CGGCACGCGG ATCGATCGCC TCACGTATGT GGGCGGCACG
TGGCACTACG CGAAGAACGG CGAGATGGCG CTGTACGTCG ATCAGGCCGA CGACGTCTGG
CGTCAGTACT ACGGTTCTGT TGCGCAATCG TTCGGCGATC CGACCACCAT CAAGTGGAGC
GGTCTCGCCA ACATCTACTC GACGCACGAC ACCGGCGCGT CGCGTCAGGG GCACATCAAC
AGCAATGCGT ACAGCGTGTC GGTCTCCGCG CAGCACGGCC CGCATGCGCT GCTGCTCGGC
TACCAGCAGG TGCTCGGCGA CCAGTTCTTC GACTACGTCA ACGAGACCAA CGGTATCTAC
CTGACCAACT CGATGGACGT GGACTACAAC GCGCCACACG AACAGTCGCT GCAATTGCGC
TATACGTTCG ACGGCAAATA CGCCGGCGTG CCCGGGCTCA AGGCGATGTT CTGGGGGCAA
TACGGTTGGG GCGCGGATGC GTCGGCGGGT GCGGCGGAGA ATGCCTCGCC TTCGGCGCCG
CTGCATGATC TGTACTGGAA GAACGGCGAG CCGGTGCATG GCCACCATCA CGAGTTCGGT
TTCATTCCGA GCTACACGCT GCAAAGCGGA CGCTTCAAGG ACACGAAGGT TACGTTCATC
GCGATGTGGC ACAACAGCCA GTATCACTAC TCGGACGGCA ACAATATGGA GTACCGGCTG
GTCGTGAATG TGCCGGTGAA GGTGTTCTAA
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| Protein sequence | MKDTRSKNRS KKTGAATFFY CAFTLPALTL AANAYADDGV TEPTSEASKT QTVAQTLSSP
AQLAQTAQPT TTQQNNSSSK RRAEQGGQVR NDQPDTTNAI VNAEASQTVT PPAPPSSQAA
SKGFIADSHL NLQFRNYSDY FQAPNTIYRH AWVQGAQANF ESGYTQGLIG FGIDASLFGA
LKLDGGNGAG NMVHVGKDGG GSQQLAWAYP GMYDIKGRIS ETVVKYGLQD VTNPFLEPHD
NRALPPTFLG VSMVSNDLAH TELQAGSFTK VDARGHTNLT NLTTSYGGTR IDRLTYVGGT
WHYAKNGEMA LYVDQADDVW RQYYGSVAQS FGDPTTIKWS GLANIYSTHD TGASRQGHIN
SNAYSVSVSA QHGPHALLLG YQQVLGDQFF DYVNETNGIY LTNSMDVDYN APHEQSLQLR
YTFDGKYAGV PGLKAMFWGQ YGWGADASAG AAENASPSAP LHDLYWKNGE PVHGHHHEFG
FIPSYTLQSG RFKDTKVTFI AMWHNSQYHY SDGNNMEYRL VVNVPVKVF
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