| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4416 |
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| Symbol | |
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| ID | 6278257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 478283 |
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| End bp | 479383 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642615509 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001888162 |
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| Protein GI | 187919131 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.401076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.621386 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACTA CTCCATCGAC AATCGCTCCG CCGAGCGCGG CGCAGACCGC CAAACCGGCA
CGTCGCATTC CGTGGATGCT GCTCGCGGTC ATCACGGTCC TTGCCGTGCT GGCGCTTGCG
GCGTCGTACT GGTTCTTCGT CGGCCGCTTC GTCGAAACGA CTGACGATGC CTATGTGGGC
GGCGATGTCA CCGTGATGGC GCCGAAGGTG AACGGCTTCG TTACGGACGT GCTGGTCCAC
GACAACCAGT TCGTCCACGC GAACGACGTG CTGATCCGGC TGGATGCGCG CGACTACGAC
GCGCGGCTCG CGCAGGCCAC GGCGGAAGTG CAGAGCGCAC AAGCGTCGGT GACCGAACTG
CAGGCGAAGA AGTCCTTGCA GCTCGCCACC ATCAACGAGC AGGCCGCCGA GGTCCGCGCG
TCCGGCGCCG AACTGACGCG CAGCGCCGCG GACCAGACGC GCTACCGCGA ACTGGTGAAG
GACGACGCGG TATCGAATCA GGTCGTCGAA CGCGCGGACG CCGATCTGAC CAAAGCGCAC
GCGGCGGTCG ATCGCAGCAG CGCGGCACTG ATCGCGGCGC AACGTCAGAT CGCCGTGCTC
GACGCGCAGA TCGGCGACGC CGAGGCGCGC ATCGCGACCG CGCAGGCCGC CCAGCGTGTC
GCGGCGCTGA ACGTGGAGTA CACGACGATT CGCTCGCCCA TTGACGGCTA TGTCGGCAAT
CGCACGGCGC GTGTCGGCCT GCTGGCGAAC ACCGGCGTAT CGCTGCTGAC CGTGGTGCCG
TCGAGCGGAT TGTGGATCGA CGCCAACTTC AAGGAAGATC AGTTGAAGAA GATGCGCGTC
GGCGACAGCG TCGATGTCGA TCTCGACGCA TCGAGCACGC CGATTCACGG CGTGGTGGAA
AGTCTGGCGC CGGCCACTGG CGCGACGTTC AGCGTGCTGC CCGCGGAGAA CGCCACTGGC
AACTTCACGA AGATCGTGCA GCGCGTGCCG GTGCGTGTGC GGCTCGATGT GCCGAAGTCC
ATGCAAGGCG TGCTGCGCCC CGGCTTGTCG GCCACGGTGA AAGTGCATCT CGATAGCGGC
GACACGCCGG CGCGTGGATG A
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| Protein sequence | MSTTPSTIAP PSAAQTAKPA RRIPWMLLAV ITVLAVLALA ASYWFFVGRF VETTDDAYVG
GDVTVMAPKV NGFVTDVLVH DNQFVHANDV LIRLDARDYD ARLAQATAEV QSAQASVTEL
QAKKSLQLAT INEQAAEVRA SGAELTRSAA DQTRYRELVK DDAVSNQVVE RADADLTKAH
AAVDRSSAAL IAAQRQIAVL DAQIGDAEAR IATAQAAQRV AALNVEYTTI RSPIDGYVGN
RTARVGLLAN TGVSLLTVVP SSGLWIDANF KEDQLKKMRV GDSVDVDLDA SSTPIHGVVE
SLAPATGATF SVLPAENATG NFTKIVQRVP VRVRLDVPKS MQGVLRPGLS ATVKVHLDSG
DTPARG
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