Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4381 |
Symbol | |
ID | 6279434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 438866 |
End bp | 439630 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642615475 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_001888128 |
Protein GI | 187919097 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACGT CAAACCAGTC GAATGCAGCT GCAGTGCGCG CGTTTCGCGT ACTCGAAACG CTTGCCGAAG CGGGCAGCCC GCTTTCGATG ACGGAGCTCG TCAATGCGCT CGGTCTGCCC AAGCAGACCG TTCACCGCAT CCTCGTGCAA TTGATGGATG CGTGGCTCGT CACACGCGGC GCGGGCGACC GACTTTACGA ATGTTCGCCA CGCGTGCGCA TGCTCGCGGT CAATGTGTTG ATGCATGCGG GACCGGCCGC CGCGCGTCAT GTGCTGCTCG AACAGCTAGT GGCGAAAATC GGTGAGACCT GCAACCTGAC CATGCTGTCG GGCAACGATG TGGTCTACGT GGATCGTGTC GAAACCGAGT GGCCGCTACG CATGCATTTG CAGCCGGGTT CCCACGTGCC GCTGCACTGC TCGGCAAGCG GCAAGCTGCT GCTGAGCTTT CTGCCGAAGG ACCGGCGCGA ACGCGTGATC GAGACGCTGC CGTTGCGTGG TTATTCGGAA CGGACGATCA CCGATCGCGA CGCATTGCGC AAGGAATTGA GCACCACGCG GCGGCGGTTG CTTGCGATCA ACAACCAGGA ACATCTGCAA GGGCTGATCG CGATTGCCGT GCCGGTGATG CTGGATCGCA ATCGCGCCTG CGCGGCGATT GCCGTGCAGG CGCCGGTGGG CAGAGTCACG CTGGATGATC TGCTCGCGTT TGTGCCTGAT TTGCGCCACG CGGCGGAAGA GACGGCGAAG ACGTTTCAAG AATGA
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Protein sequence | MSTSNQSNAA AVRAFRVLET LAEAGSPLSM TELVNALGLP KQTVHRILVQ LMDAWLVTRG AGDRLYECSP RVRMLAVNVL MHAGPAAARH VLLEQLVAKI GETCNLTMLS GNDVVYVDRV ETEWPLRMHL QPGSHVPLHC SASGKLLLSF LPKDRRERVI ETLPLRGYSE RTITDRDALR KELSTTRRRL LAINNQEHLQ GLIAIAVPVM LDRNRACAAI AVQAPVGRVT LDDLLAFVPD LRHAAEETAK TFQE
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