Gene Bphyt_4381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4381 
Symbol 
ID6279434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp438866 
End bp439630 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content62% 
IMG OID642615475 
Producttranscriptional regulator, IclR family 
Protein accessionYP_001888128 
Protein GI187919097 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACGT CAAACCAGTC GAATGCAGCT GCAGTGCGCG CGTTTCGCGT ACTCGAAACG 
CTTGCCGAAG CGGGCAGCCC GCTTTCGATG ACGGAGCTCG TCAATGCGCT CGGTCTGCCC
AAGCAGACCG TTCACCGCAT CCTCGTGCAA TTGATGGATG CGTGGCTCGT CACACGCGGC
GCGGGCGACC GACTTTACGA ATGTTCGCCA CGCGTGCGCA TGCTCGCGGT CAATGTGTTG
ATGCATGCGG GACCGGCCGC CGCGCGTCAT GTGCTGCTCG AACAGCTAGT GGCGAAAATC
GGTGAGACCT GCAACCTGAC CATGCTGTCG GGCAACGATG TGGTCTACGT GGATCGTGTC
GAAACCGAGT GGCCGCTACG CATGCATTTG CAGCCGGGTT CCCACGTGCC GCTGCACTGC
TCGGCAAGCG GCAAGCTGCT GCTGAGCTTT CTGCCGAAGG ACCGGCGCGA ACGCGTGATC
GAGACGCTGC CGTTGCGTGG TTATTCGGAA CGGACGATCA CCGATCGCGA CGCATTGCGC
AAGGAATTGA GCACCACGCG GCGGCGGTTG CTTGCGATCA ACAACCAGGA ACATCTGCAA
GGGCTGATCG CGATTGCCGT GCCGGTGATG CTGGATCGCA ATCGCGCCTG CGCGGCGATT
GCCGTGCAGG CGCCGGTGGG CAGAGTCACG CTGGATGATC TGCTCGCGTT TGTGCCTGAT
TTGCGCCACG CGGCGGAAGA GACGGCGAAG ACGTTTCAAG AATGA
 
Protein sequence
MSTSNQSNAA AVRAFRVLET LAEAGSPLSM TELVNALGLP KQTVHRILVQ LMDAWLVTRG 
AGDRLYECSP RVRMLAVNVL MHAGPAAARH VLLEQLVAKI GETCNLTMLS GNDVVYVDRV
ETEWPLRMHL QPGSHVPLHC SASGKLLLSF LPKDRRERVI ETLPLRGYSE RTITDRDALR
KELSTTRRRL LAINNQEHLQ GLIAIAVPVM LDRNRACAAI AVQAPVGRVT LDDLLAFVPD
LRHAAEETAK TFQE