| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4335 |
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| Symbol | |
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| ID | 6278982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 391439 |
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| End bp | 391993 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642615429 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_001888082 |
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| Protein GI | 187919051 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.44138 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC GAGACACCGA CATCACCGCG ACCGTGGTGC GTGAGCGCAC GAGGCTCGTC
AATTTTATCC GGCGCCGAAT TCGCGACCCA GACGATGCCG AGGACATTCT GCAGGATGTG
TTCCACGAAT TCGTGCAGGC TTACCGGCTT CCCGCGCCGA TCGAACAGGC GAGTGCGTGG
CTGTTCCGTG CCGCGCGCAA TCGCATCGTC GATCGGTTTC GCAAGAAGAA AGAGCAGCCG
CTGGCAGATC TGTCCGCGAG CGGAGACGAC GCCGACAGTG AGTATCGCCT CGACCTCGAC
CTGCCGGCGC ACGATGCGGG TCCCGAAGCC CTCTACGCGC GCGCTCTATT GCTGAAGGCC
TTGCAGGACG CGCTCGATGA GTTGCCAGCG AATCAACGTG AGGTCTTTGT CGCGCACGAA
CTGGAGGGCC GGTCCTTCAA GGAGATGGCG GCGGAAAGCG GCGTCACGCT CAATACGTTG
CTCGCGCGCA AACGCTATGC GGTCTTGCAT CTGCGTGCGC GGCTGCAGGC CATTTGTGAC
GAACTGGGTA TCTAA
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| Protein sequence | MTERDTDITA TVVRERTRLV NFIRRRIRDP DDAEDILQDV FHEFVQAYRL PAPIEQASAW
LFRAARNRIV DRFRKKKEQP LADLSASGDD ADSEYRLDLD LPAHDAGPEA LYARALLLKA
LQDALDELPA NQREVFVAHE LEGRSFKEMA AESGVTLNTL LARKRYAVLH LRARLQAICD
ELGI
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