Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4332 |
Symbol | |
ID | 6279186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 385978 |
End bp | 389601 |
Gene Length | 3624 bp |
Protein Length | 1207 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642615426 |
Product | Isoquinoline 1-oxidoreductase., Gluconate 2-dehydrogenase (acceptor) |
Protein accession | YP_001888079 |
Protein GI | 187919048 |
COG category | [C] Energy production and conversion |
COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGGC CGGATTTCAG CGTCGATCGA CGCAGCGCAC CGCCGTCGCG GCAGCAGCTC TACGATGCGC AGAGCGTGCT GATCGTCACG CGCGCGCCGC AGGCGCCGGT GAAGCCGGCG ATCGGGCAGC CGGGCTCGCG CTCATCGTTC GTGCCGACTG AGGCGGACAT GTTTCTCGTG GTGCGCGATG ACGGCAGCGT GGTCGCGTTC AACGGTCACG TCGATCTGGG CACGGGCATC GGCACGGCGC TCGCGCAGAT CGTCGCGGAA GAACTGGATG TGCCGTTGAC GCGCGTGTCG ATTGTGCTCG GCCACACGCG TGAAGCGCCG AATCAGGGGC CGACGATTGC CAGCGCGACG ATTCAGATTT CGGCGGTGCC GTTGAGGCAC GCTGCGGCGC AGGCGCGGCA ATTTCTGCTG GCGGAAGCGG CGGCGCGCTT CAATGTGAGC GTCGAGCAAC TCGATGTGCG TGATGGCGTC GTTTATCGAC GTGACGGCGG CGCGGCTGCG AAAGGCATTG GCTACGGCGA GTTGATTAGC GGAAAACGCG TCGAATTGCA GCTCGCCACC GATGCGCCGT TGAAGTCGCC GGACACGTAC AAGATCGTCG GCAAGAGCAC GCCGCGCGTC GATATTCCGG CGAAGGCAAC GGGCGAATTG AGTTTCGTGC ACGACGTCCG CGTGCCCGGC ATGTTGCATG GACGTGTGGT GCGGCCGCCG TACGCCGGTG TCGCGCAAGG CGACTTCATG GGCAATAGTC TGCTGCAGGT GGATGAAGAC TCGGTTAGCG AATTGCCCGG CATCGTCAAA GTGGTAGTGA TTCGCGATTT CGTCGGCATC GTGGCTGAGC GTGAAGAAGT CGCGCAGCAG GCCGCGAAGC GGCTTCGCGT GCAATGGAAA GAGGTAGAAG GTTTGCCGTC GCTCGAAACC AGCGAGGAAG TGGAAGCGGC GTTGCGCGCG AATCCCGCCA AGCGGCGCGA TCTGGTGATC GAAGGCGATG TCGATGCAGC GCTCGCGCAA GACTCCGCCC GCACGCTGGA ACGCACCTAC GTATGGCCGT TTCAGATGCA TGCGTCGATT GGGCCTTCTT GCGCGGTGGC CGATTATCGC GAAGGCGCTT TGAAGGTCTG GTCGGGCACG CAGAACCCGC ATTCGTTGCG CGCCGATCTT GCTCTGCTGA TGAGTATGGA CGAAGCGCAC ATCGAAATCG TGCGGATGGA AGCGGCGGGC TGCTACGGCC GCAATTGCGC GGACGATGTC GCCGCCGACG CCGCATTGCT TTCGCGCGCC ACCGGCAGTC CGGTGCGCGT TCAACTCTCG CGCGAAGACG AGCACGCGTG GGAACCGAAA GGCGCCGCGC AATTGATGGA CGTGCGCGGC GCGCTGAATG CCGAAGGCGA ACTGGCGGCC TACGACTTTG CGACGCGTTA TCCGTCCAAC GATGCGCCGA CGCTGGCATT GCTACTGACG GGCACAATTT CCGCGCAGCC ACAGGTGTTC GAAATGGGCG ACCGCACGGC GGTGCCGCCG TACGATTACC GCAGCATGCG CATCGTCTGC GACGACACGC CGCCGATCGT TCGGGCGTCG TGGTTGCGCG GCGTGTCCGC GTTGCCGAAT ACGTTCGCGC ACGAGTCCTT CATCGATGAA CTCGCGGTGG AAGCGGGCAT CGATCCGGTC GAGTTTCGCC TGAAGCATCT GACCGATCCG CGAGCGATCG AACTGGTCAA AGCGGTCGCG GAAAAAGCTG GCTGGGAAGC ACGCAGCGCC GAGCGCAACG CCGAGCTTAA AGATGAGGAA GGCGACATCG CACGCGGGCG CGGCATCGCT TACGCCCGCT ACGTGCACAG CAAATTTCCC GGCTTCGGTG CGGCATGGTC CGCATGGGTG GCCGATGTCG AAGTGAATCG CAAGAGCGGC GATCTCGCGG TGACGCGCGT GGTGGTCGGC CAGGACACCG GCACGATGGT GAATCCCGAC GGCGTGCGTC ATCAGATTCA CGGCAACGTG ATCCAGACGA CCAGCCGTGC GTTGAAAGAG CGCGTGACGT TCGGCGAGAA CGCAGTGACG AGCCAGGAGT GGGGCGCGTA TCCGATCCTC ACCTTCCGCG AAGTACCCGT GATCGACGTG GTGATGATGC CGCGCCACGG CGAGCCGCCG ATGGGCGCGG GCGAATCCGC GTCGCTGCCC GGCGCGGCGG CGATTGCCAA TGCGCTCTTC GATGCCACGG GCGTGCGTTT TCGCCGGCCG CCGTTCACGC CGGAAACGAT CCGCGCCGCG CTCGCCGATG CGCAAGCCGA AGACAAGGCG GCGCGCAGGA AGAAGCGCTG GCGGTTTGGG TTTTTAGGCG CGTTGGCGGC AGGAGCGGCG GGTTGGCTCG GCGCATTGTC GCTCGCGCCG CACGCTATCG CGCCGATCAC GCCGCCGCTG GCGAGCGCGT TCGCGCCGGA GCTCGTGGCG CGCGGCAAGC TGCTGGCATC GCTCGGCAAC TGCGCGGTTT GCCACACCGC GCACAACGGC GTGCCGAACG CCGGCGGCAA ACCGCTCGAT ACGCCGTTCG GCACCGTGTA CAGCACCAAT ATCACGCCGG ACGGTCAGAC CGGCATCGGC AACTGGTCGC TCGAAGCCTT CGTGCGGGCG ATGCGGCAAG GCATCAGCCG CGATGGCCAT CGCCTGTATC CGGCCTTTCC GTACACCTCG TTCCAGAACA CTTCCGACGA CGATCTCAAA GCGCTGTATG CCTATCTGAT GGCGCAAACG CCGGTGCGCT CACATCCGCC GGAAACGAAG CTCGCGTACC CGTTCAGCGT GCGTCCGCTG ATGTCTGCCT GGAACGCTCT ATTTCTCGGG CGCACGACGT TCACCGCCAG CACGACGCAA ACCGCGCAAT GGAATCGCGG CGCGTATCTG GTGAACGGAC TCGGCCATTG CGGCGCGTGC CACACGCCGC GCAATGCATT TGGCGCCGAG AAAACCGGTG CGGCGTTCAT GGGCGGCGGC ATGGCGGACG GCTGGGAAGC GCCCGCGTTG TCGGCGCTCT CGACCGCACC CGTGCCCTGG AGCGAGGACG AACTTTTCAG CTACTTGCGC AATGGTCACG CGCCGCTGCA CGGCGTCGCG GCCGGGCCGA TGGCGCCGGT CGTCGGCGAT CTGGCGGCGC TGCCCGACAG CGATATTCGC GCGATGGCCA CGTATCTCGC GTCGCTCAAT CCGTTGGAAC CGAACGCCGA TCCCGTAGCG ATGGCGCGTC AGTATGAACA GGCCAGCGCA ATCTCGGGCG CGCCAGCGGG CCTCGGCGCG CGGCTTTTCG ACGGCGCGTG CGCCGCATGT CATCACACGG GTGGCGGGCC GCAGTTGTTC GGCGCGCATC CTTCGCTGGC GCTCAACACG AATCTGCACA GCGCGACGCC CGATAATCTG ATTCGCGTGA TTCTCGACGG CATCGGCTCG CCTGCGCGGC CCGAACTCGG TACGATGCCG GCTTACCGCG ACAGTTTCAA CGACGTCCAG GTCGCCGAAC TCGTGTCGTA CCTGCGTCAG CAATTCGCCG GTGGCAAGCC CGCATGGCAG GACGTCGCGG CGAGGGTCGC CAGGATTCGC GCGACGCCGC GGCGGGCCGA CTGA
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Protein sequence | MTGPDFSVDR RSAPPSRQQL YDAQSVLIVT RAPQAPVKPA IGQPGSRSSF VPTEADMFLV VRDDGSVVAF NGHVDLGTGI GTALAQIVAE ELDVPLTRVS IVLGHTREAP NQGPTIASAT IQISAVPLRH AAAQARQFLL AEAAARFNVS VEQLDVRDGV VYRRDGGAAA KGIGYGELIS GKRVELQLAT DAPLKSPDTY KIVGKSTPRV DIPAKATGEL SFVHDVRVPG MLHGRVVRPP YAGVAQGDFM GNSLLQVDED SVSELPGIVK VVVIRDFVGI VAEREEVAQQ AAKRLRVQWK EVEGLPSLET SEEVEAALRA NPAKRRDLVI EGDVDAALAQ DSARTLERTY VWPFQMHASI GPSCAVADYR EGALKVWSGT QNPHSLRADL ALLMSMDEAH IEIVRMEAAG CYGRNCADDV AADAALLSRA TGSPVRVQLS REDEHAWEPK GAAQLMDVRG ALNAEGELAA YDFATRYPSN DAPTLALLLT GTISAQPQVF EMGDRTAVPP YDYRSMRIVC DDTPPIVRAS WLRGVSALPN TFAHESFIDE LAVEAGIDPV EFRLKHLTDP RAIELVKAVA EKAGWEARSA ERNAELKDEE GDIARGRGIA YARYVHSKFP GFGAAWSAWV ADVEVNRKSG DLAVTRVVVG QDTGTMVNPD GVRHQIHGNV IQTTSRALKE RVTFGENAVT SQEWGAYPIL TFREVPVIDV VMMPRHGEPP MGAGESASLP GAAAIANALF DATGVRFRRP PFTPETIRAA LADAQAEDKA ARRKKRWRFG FLGALAAGAA GWLGALSLAP HAIAPITPPL ASAFAPELVA RGKLLASLGN CAVCHTAHNG VPNAGGKPLD TPFGTVYSTN ITPDGQTGIG NWSLEAFVRA MRQGISRDGH RLYPAFPYTS FQNTSDDDLK ALYAYLMAQT PVRSHPPETK LAYPFSVRPL MSAWNALFLG RTTFTASTTQ TAQWNRGAYL VNGLGHCGAC HTPRNAFGAE KTGAAFMGGG MADGWEAPAL SALSTAPVPW SEDELFSYLR NGHAPLHGVA AGPMAPVVGD LAALPDSDIR AMATYLASLN PLEPNADPVA MARQYEQASA ISGAPAGLGA RLFDGACAAC HHTGGGPQLF GAHPSLALNT NLHSATPDNL IRVILDGIGS PARPELGTMP AYRDSFNDVQ VAELVSYLRQ QFAGGKPAWQ DVAARVARIR ATPRRAD
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