Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4317 |
Symbol | |
ID | 6279330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 368163 |
End bp | 369011 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642615411 |
Product | ABC-2 type transporter |
Protein accession | YP_001888064 |
Protein GI | 187919033 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTTA CCTATAAACA CGATGGTCGC GAGGAGTCTC ATCCCCGTGC TCATTTTCGT GATCTCTTTT TACTGCCCTG GCAGCAACGC CAGCTTATCG TCGCGCTAAC CCGGCGGGAC ATTTTGAGCC GGTATCGCGG GTCAATAATG GGACTGGCCT GGTCCATCGT TCAGCCGTTA ATCATGCTCG CCATGTACAC GGTTGTGTTC GGCACACTGT TGAAATCGCG CTGGCCCGGA ACCGACAATA GTTTTCAGTT CGCGGTGATC CTGTTCGTGG GCCTGATTCT TTTCAATTTT TTCGCCGAAT GCCTGAATAG AGCGCCGACC ATTATCACGA CCAACGCGAA CTACGTGACG AAGGTCGTCT TTCCTCTCGA GATCCTGCCG TGGATTACAG TCGCCTCGGC GGCATTTCAC TTCCTGACGA GTTTTGCCGT CTGGCTTGTC TTTGCGCTAT GCGTATACGG AAAGCTTCAA TGGACGATCG TCTTTTTGCC GGCGCTCTTC ATCCCGCTCG CATTTGTCGG CGTGGGTGTG GGTTGGCTGT TCGCCGCCAC CGGCGTCTAC GTGCGTGACC TGACGTACGT CACCACGCTG CTTTCATCTC TGTTGATGTT CCTGTCGCCG GTTTTCTACG CGCTCGATAC TTTGACGCCC GCTTTCAGGG CGCTCATTCT GACCAATCCG CTGACGTTCA TCATCGAGCA GGCGCGCGCG GTCATGATTG CGGGCGAGTT GCCTGACTTC GTGGGCATAG CGATCTATCT GTCATGCAGC ATCGGGTTCG CGTGGATCTG TCTGGCCTGG TTCCAGAAGA CACGCGAAGG TTTCGCGGAT GTTCTGTAA
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Protein sequence | MSFTYKHDGR EESHPRAHFR DLFLLPWQQR QLIVALTRRD ILSRYRGSIM GLAWSIVQPL IMLAMYTVVF GTLLKSRWPG TDNSFQFAVI LFVGLILFNF FAECLNRAPT IITTNANYVT KVVFPLEILP WITVASAAFH FLTSFAVWLV FALCVYGKLQ WTIVFLPALF IPLAFVGVGV GWLFAATGVY VRDLTYVTTL LSSLLMFLSP VFYALDTLTP AFRALILTNP LTFIIEQARA VMIAGELPDF VGIAIYLSCS IGFAWICLAW FQKTREGFAD VL
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