| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4298 |
|---|
| Symbol | |
|---|
| ID | 6280560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 347247 |
|---|
| End bp | 348266 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642615392 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001888045 |
|---|
| Protein GI | 187919014 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00374] conserved hypothetical protein
[TIGR03476] putative membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.09392 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.365845 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCG CGGCCCTGAT TTTGCTGTCG ATCGGGACGG CGCTGTTTGT TGGCCTGCTC
GCGTGGCAGG GTTTCGGCTC GGTCGCCTCG ACGCTGCTCA CGGCAGGCTG GGGACTGGCG
CTCGTCGCGG CGTTTCACCT CGTGCCCGTG CTTCTCGATG CCGGCGCGAT CTCGGTGTTG
TTCCATCCTC GGCGTGACGG CATCCACCAC GATCTGACGT GGCGCGACGC GCTGTTCGCG
CGCTGGATCG GCGAGTCGGT GAATAGCCTG TTGCCGGCCG GCCAGATCGG TGGACCGGTG
GTCATGGTGC GGCAGCTGTC CCAGCGCGGC ATGCGCATGC GCGATGCGGC CGCGGCGATC
ACGGTGAGCA CCACCGCGCA GGCGCTCGCG CAAATCATCT TCGCGCTGGG TGGCCTGCTG
CTGTTCGGCG CTTACGCCGC GCACGGCGCG CTGCACGATC TGCAAACCGC CACGCTCATC
GCGACCGGTG TGCTGGGCGC GATGATCGTC GGGTTCTACT ACGCGCAACG GCGCGGTCTG
TTCGGCCGCC TGCTCGGCGT GGTCTCCAAG GTCTTCGGCA AGCGCGACTG GTCTTCGCTG
ATGACGCGCG CCGAAGCCGT CGACGCCGCC GTGCAGGCGA TGTACCGCGA ACGCGGCCGC
GTGGCGGCGA GCTTCGCGAT GAGCCTGCTG GGCTGGATCG TCGGCACGGT GGAAGTGTGG
CTCGCGCTGC GCTTTCTCGG ACATCCCGTC GACTGGGTCG ACGCGTTGTT GCTCGAAAGC
CTGGGCCAGG CCATTCGCGG CGCGGCATTC ATGATTCCCG GCTCACTCGG TGTGCAGGAA
GGCGGCTATC TGCTGCTCGC GCCGCTGGTC GGTTTGCCGC CGGACGCGGC CCTGGCGTTG
TCGCTCGCCA AGCGCGCCCG CGAAATCCTG CTAGGCTTGC CGGGTCTGCT GGTTTTGCAC
TTCAGTGAAC GAAGCTGGCA ACGGCGCCGC GCTCTTGGGC GCGTGCCGGT TGTCGATTAA
|
|---|
| Protein sequence | MSRAALILLS IGTALFVGLL AWQGFGSVAS TLLTAGWGLA LVAAFHLVPV LLDAGAISVL
FHPRRDGIHH DLTWRDALFA RWIGESVNSL LPAGQIGGPV VMVRQLSQRG MRMRDAAAAI
TVSTTAQALA QIIFALGGLL LFGAYAAHGA LHDLQTATLI ATGVLGAMIV GFYYAQRRGL
FGRLLGVVSK VFGKRDWSSL MTRAEAVDAA VQAMYRERGR VAASFAMSLL GWIVGTVEVW
LALRFLGHPV DWVDALLLES LGQAIRGAAF MIPGSLGVQE GGYLLLAPLV GLPPDAALAL
SLAKRAREIL LGLPGLLVLH FSERSWQRRR ALGRVPVVD
|
|---|
| |