Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4157 |
Symbol | |
ID | 6278497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 199674 |
End bp | 200639 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642615257 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_001887910 |
Protein GI | 187918879 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.645067 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCGCC ATTTCCTTCC GGCGCGCCGT CGCGCCATCG CAGCCGGCGC AGCTTTCCTC GCTGTGTCGA TTTTGCCGAT GCCGGCAGCC TTCGCCCAGG CCGCCCATAA ACCGAAAGTC GCGCTTGTCA TGAAGTCGCT GGCAAACGAG TTCTTCCTGA CCATGGAAAC GGGCGCCAAG GATTATCAGA AGCAGAATCC GGCGAAGTTC GATCTCGTCA CCAACGGCAT CAAGGACGAG ACGGACACCG CGAACCAGAT CCGCATCGTC GAGCAGATGA TCGTCTCGAA GGTCGACGCG CTGGTGATCG CGCCGGCTGA CTCGAAGGCG CTGGTGCCGG TCCTGAAGAA GGCGGTCGAT GCCGGCATCA TCGTGGTCAA TATCGACAAC AAGCTGGATA ACGACGTCCT CAAGTCGAAA GACCTGAACA TCCCGTTCGT CGGGCCGGAT AACGCGAAGG GCGCGCAGAA GGTCGGTGAC TACCTGGCCA AGCACCTGAA ATCGGGCGAC AACGTCGGCA TTATCGAAGG TGTCACGACC ACGACCAACG CGCAGCAACG CACGGCCGGC TTCAAGCAGG CCATGGCGGC GGGCGGCATG AAGGTCGTCG CGCTGCAATC GGGCGAGTGG GAAATCGACA AGGGCAACGC CGTCGCGAGC CAGATCCTCA ACGCGAATCC GGACGTCAAG GCTTTACTGT GCGGCAACGA CAATATGGCG ATCGGCGCCG TGTCGGCCGT GCGGGCGGCC GGCAAGGCAG GCAAGGTGCA GATCGTCGGT TACGACGACA TCAACGCGAT CAAGCCGATG CTCAAGGACG GCCGCGTACT CGCCACCGCC AATCAATACG CAGCCAAGCA GGCCGTGTTC GGCATCGACA CGGCTTTGAA GGCGCTCTCC GAACACAAGA AGCAGTCTGA ATTGTCCGGC GTTGTCGAAA CGCCGGTCGA TCTGGTCACC AAGTAA
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Protein sequence | MIRHFLPARR RAIAAGAAFL AVSILPMPAA FAQAAHKPKV ALVMKSLANE FFLTMETGAK DYQKQNPAKF DLVTNGIKDE TDTANQIRIV EQMIVSKVDA LVIAPADSKA LVPVLKKAVD AGIIVVNIDN KLDNDVLKSK DLNIPFVGPD NAKGAQKVGD YLAKHLKSGD NVGIIEGVTT TTNAQQRTAG FKQAMAAGGM KVVALQSGEW EIDKGNAVAS QILNANPDVK ALLCGNDNMA IGAVSAVRAA GKAGKVQIVG YDDINAIKPM LKDGRVLATA NQYAAKQAVF GIDTALKALS EHKKQSELSG VVETPVDLVT K
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