Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4102 |
Symbol | |
ID | 6279024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 141645 |
End bp | 142994 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642615203 |
Product | glucarate dehydratase |
Protein accession | YP_001887856 |
Protein GI | 187918825 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACGA AATCTTCCGA ACTGAACGCC ACTCCGGTCG TCACTGAACT GCGTGTCGTG CCTGTCGCCG GCCGCGACAG CATGTTGCTT AATCTCAGCG GCGCGCATGG TCCGTTCTTC ACGCGCAATA TCGTCATTCT TCGCGACAGC GCGGGACACA CCGGCGTTGG TGAAGTGCCG GGCGGCGAGA GCATTCGCAA GACTATCGAC GACGCGCGTC CGCTCGTCGT CGGCCAATCG ATCGGCAATC TGCAAGCGGT CCTGAACAAG GCGCGCACGC AATTCGCGGA CCGCGACGCG GGCGGCCGCG GTTTGCAGAC CTTCGATCTG CGCACCACGA TTCACGCGGT GACCGCGCTC GAAGCCGCGC TGCTCGATCT GCTCGGCCAG CATCTGGGCG TGCCGGTCGC CGCATTGCTC GGCGAAGGCC AGCAACGCGA CGAAGTGGAA ATGCTCGGCT ATCTGTTCTA TATCGGCGAC CGCAAGAAGA CCGATCTGGA ATATGCCAGC GGCGCCGATG GCCGCGACGA CTGGGAGCGC GTGCGCACCG AAGAAGCCAT GACGCCCGAG GCGGTGGTGC GTCTGGCCGA AGCCGCACAG GCGCGCTACG GCTTCAACGA CTTCAAGCTC AAAGGCGGCG TGCTGCCCGG CGACGCCGAG ATCGAAGCCG TCACCGCACT CGCCGAGCGT TTCCCGAAGG CACGCGTCAC GCTGGACCCG AACGGCGCCT GGTCGCTGGC GGAAGCGGTG CGCCTGTGCC GCGACCAGCA CGACGTGCTC GCCTACGCGG AAGATCCGTG CGGCGCCGAA AACGGTTACT CAGGCCGCGA GGTGATGGCC GAATTCCGCC GCGCGACCGG CTTGCCGACA GCGACCAACA TGATCGCCAC CGACTGGCGC CAGATGGGTC ACGCGATCCA GTTGCAATCC GTGGATATTC CGCTTGCCGA TCCGCACTTC TGGACCATGC AGGGCTCGGT GCGCGTCGCG CAGATGTGCA ACGACTGGGG CCTCACGTGG GGTTCGCACT CGAACAATCA CTTCGACATT TCGCTTGCGA TGTTCACGCA CGTGGCGGCC GCTGCGCCCG GCAAGATCAC CGCGATCGAC ACTCACTGGA TCTGGCAGGA CGGCCAGCGT CTGACGCGCG ATCCGCTGCG GATCGTCGGC GGCAAGGTCA AGGTGCCGCA GGCCGCGGGG CTCGGTATCG AACTCGACAT GGACGAGATC GAGAAGGCGC ACGCGCTTTA TCAGCAACAC GGCCTCGGCG CGCGCGACGA CGGCGTGGCC ATGCAATATC TGATTCCGAA CTGGAAGTTC GACAACAAGC GCCCGTGTCT GGTGCGTTGA
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Protein sequence | MSTKSSELNA TPVVTELRVV PVAGRDSMLL NLSGAHGPFF TRNIVILRDS AGHTGVGEVP GGESIRKTID DARPLVVGQS IGNLQAVLNK ARTQFADRDA GGRGLQTFDL RTTIHAVTAL EAALLDLLGQ HLGVPVAALL GEGQQRDEVE MLGYLFYIGD RKKTDLEYAS GADGRDDWER VRTEEAMTPE AVVRLAEAAQ ARYGFNDFKL KGGVLPGDAE IEAVTALAER FPKARVTLDP NGAWSLAEAV RLCRDQHDVL AYAEDPCGAE NGYSGREVMA EFRRATGLPT ATNMIATDWR QMGHAIQLQS VDIPLADPHF WTMQGSVRVA QMCNDWGLTW GSHSNNHFDI SLAMFTHVAA AAPGKITAID THWIWQDGQR LTRDPLRIVG GKVKVPQAAG LGIELDMDEI EKAHALYQQH GLGARDDGVA MQYLIPNWKF DNKRPCLVR
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