Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4080 |
Symbol | |
ID | 6277961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 115165 |
End bp | 117393 |
Gene Length | 2229 bp |
Protein Length | 742 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642615181 |
Product | isocitrate dehydrogenase, NADP-dependent |
Protein accession | YP_001887834 |
Protein GI | 187918803 |
COG category | [C] Energy production and conversion |
COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACAC CGCCGAAGAT CATCTACACC CTGACCGACG AAGCGCCTGC TCTGGCGACT TACTCGCTGC TGCCGATCGT GAAGGCGTTC ACGCGCTCGT CCGACGTGAT CGTCGAAACG CGCGATATTT CGCTTGCCGG CCGGATCATC GCTGCATTCC CCGATTACCT GAGCGCGGAA CAGAAGGGTC CCGACGATCT GGCGGAACTG GGTGGACTCA GCACGCGTCC GGAAGCGAAT GTCATCAAGC TGCCGAACAT CAGCGCGTCG GTGCCGCAAC TGAAGGCCGC GATCACCGAA CTGCGCGATC AGGGCTACAA GCTGCCGGCG TATCCGGACG TCGCGAACAC GGACGCCGAA AAAGACGTCA AGGCGCGCTA CGACAAGATC AAGGGCAGCG CGGTCAACCC GGTGCTGCGC GAAGGCAATT CGGACCGCCG CGCGCCGCTG TCGGTCAAGA ACTACGCCCG CAAGCATCCG CACAAGATGG GCGCGTGGAG CGCGGACTCG AAGTCGCACG TCGCGCACAT GAGCGGCGGC GATTTCTACG GTAGCGAAAA GTCGGCGCTG ATCGGCGCAG CCGGTTCGGT GAAGATCGAA CTGACGGCGA CTGACGGTTC GAAGACAGTC CTCAAAGAAA AGACGGCCGT GCAAGCAGGC GAGATCATCG ACGCTTCGGT GCTGTCGAAG AACGCGCTGC GCAGCTTCAT CGAAGCGGAA ATCGCCGACG CGAAGGCCAA GGGCGTGCTG TTCTCGGTGC ACCTGAAGGC CACCATGATG AAGGTGTCGG ACCCGATCAT CTTCGGTCAC GTGGTGTCGG TGTTCTACAA AGACGTGCTG ACCAAGCACG CCGACGCGCT CGCGCAAGCC GGCTTCAACC CGAACAACGG TATCGGCGAT CTGTACGCGC GCCTGAAAGA CCTGCCGGCT GAAACGGTCG CCGCGATCGA AGCCGACATC AAGGCGCAAT ACGAACAGCG TCCGCAACTG GCCATGGTCA ATTCGGACAA GGGCATCACC AGCCTGCACG TGCCGAGCGA CGTGATCGTC GACGCGTCCA TGCCGGCCAT GATCCGCGAG TCGGGCAAGA TGTGGGGCGC GGACGGCGCG CTGCACGACG CCAAGGCCGT GATTCCGGAC CGCTGCTACG CAGGCGTTTA TCAGGCAGTG ATCGAAGACT GCAAGAAGCA CGGCGCGTTC GATCCGGTCA CGATGGGCAC GGTGCCCAAC GTCGGCCTGA TGGCGCAAGC GGCTGAAGAA TACGGCTCAC ACGACAAGAC GTTCCAGATC CCGGCGAACG GCGTGGTTCG CGTGACGGAC GCAGCCGGCA CGGTGCTGAT CGAACAGCAA GTGGAAGCGG GCGACATCTG GCGCATGTGC CAGACCAAGG ACGCGCCGGT TCAGGACTGG GTCAAGCTCG CGGTCAACCG CGCCCGCGCT ACCAACACGC CGGCCGTGTT CTGGCTGGAT GCGGCGCGCG CGCACGACGC CCAGATCATC AAGAAGGTCG AGCAATACCT GAAGAACCAC GACACCACCG GTCTGGACAT TCGCGTCATG ACGCCGGTCG AAGCGACCAA GTTCTCGATC GAGCGTATTC GCGCGGGCAA GGACACGATC TCGGTCACCG GCAACGTGCT GCGCGACTAC CTGACCGACC TGTTCCCGAT CATGGAACTG GGCACGAGCG CGAAGATGCT GTCGATCGTC CCGCTGATGG CTGGCGGCGG CATGTTCGAA ACCGGCGCGG GCGGTTCGGC GCCGAAGCAC GTTCAGCAAC TGGTCGAAGA AGGTTTCCTG CGTTGGGATT CGCTCGGTGA ATTCCTGGCG TTGGCCGCGT CGCTCGAACA TTTGAGCAGT GCGTATCACA ACCCGAAGGC GCAGGTGCTG GCCAAGACGC TGGATCAGGC AACCGGCAAG TTCCTCGACA ACGACAAGTC GCCGGCGCGC AAGGTTGGCG GCATCGACAA TCGCGGCAGC CACTTCTACC TTGCGCTCTA CTGGGCGGAA GCACTGGCCG CGCAAACCGA AGACGCGGCG CTGCAGGCGC AATTCGCCGG CGTGGCGAAG GCACTGGCTG AGAACGAAGC GAAGATCGTC GAAGAACTGG CTGCGGCACA AGGCAAGCCG GTGGATATTG GCGGTTACTA TCGTCCGAAT GTCGAACTGA CGAGCAAGGC CATGCGCCCG AGCGCCACGC TGAACAAGAT CGTGGACGCG ATTGCTTAA
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Protein sequence | MSTPPKIIYT LTDEAPALAT YSLLPIVKAF TRSSDVIVET RDISLAGRII AAFPDYLSAE QKGPDDLAEL GGLSTRPEAN VIKLPNISAS VPQLKAAITE LRDQGYKLPA YPDVANTDAE KDVKARYDKI KGSAVNPVLR EGNSDRRAPL SVKNYARKHP HKMGAWSADS KSHVAHMSGG DFYGSEKSAL IGAAGSVKIE LTATDGSKTV LKEKTAVQAG EIIDASVLSK NALRSFIEAE IADAKAKGVL FSVHLKATMM KVSDPIIFGH VVSVFYKDVL TKHADALAQA GFNPNNGIGD LYARLKDLPA ETVAAIEADI KAQYEQRPQL AMVNSDKGIT SLHVPSDVIV DASMPAMIRE SGKMWGADGA LHDAKAVIPD RCYAGVYQAV IEDCKKHGAF DPVTMGTVPN VGLMAQAAEE YGSHDKTFQI PANGVVRVTD AAGTVLIEQQ VEAGDIWRMC QTKDAPVQDW VKLAVNRARA TNTPAVFWLD AARAHDAQII KKVEQYLKNH DTTGLDIRVM TPVEATKFSI ERIRAGKDTI SVTGNVLRDY LTDLFPIMEL GTSAKMLSIV PLMAGGGMFE TGAGGSAPKH VQQLVEEGFL RWDSLGEFLA LAASLEHLSS AYHNPKAQVL AKTLDQATGK FLDNDKSPAR KVGGIDNRGS HFYLALYWAE ALAAQTEDAA LQAQFAGVAK ALAENEAKIV EELAAAQGKP VDIGGYYRPN VELTSKAMRP SATLNKIVDA IA
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