Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4077 |
Symbol | |
ID | 6277960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 109779 |
End bp | 111503 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642615178 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001887831 |
Protein GI | 187918800 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCATG ACCCGATCGC GCCGCCACGG CGTGAAGAAT GGCGCAGCAC AAACGCAGCA GTTGGGCATC AACCGACTTC GCACGAAGCG CATCGCGCAG GAGCGGTCGC GAGCGACAAG ACCCCGCAAT CAGCCACTTT CCTCTCGCTC CGCAAAAACA CTTTGGCGTT GGGCGCGGTG TGCCTCGCCT CGCTGATGTT CGGCCTCGAA ATCTCCAGCG TGCCGGTGAT CCTGCCAACG CTCGAACGCG TACTGCACGG CGACTTCAAA GGCATGCAGT GGATCATGAA CGCCTACACG CTCGCGGTGA CCACCGTGCT GATGGCGACC GGCACGCTGG CGGACCGCTT CGGCCGCCGG CGCATCTTCG TGGTCGGCAT CGCGCTGTTC GGCATCACGT CGCTGATCTG CGGACTCGCG CAAAGCGTGC CGACGCTGAT CGTCGCGCGC CTGTTGCAAG GCGCGAGCGG CGGCGCCATG CTGATCTGCC AGGTGGCCGT GCTATCGCAT CAGTTCAATG AAGGCCCCGA ACGCGCTCGC GCCTTCAGCG CGTGGGGCAT TATCTTCGGT ATTGGACTCG GGTTTGGGCC GATCATCGGC GGGGCCATCG TGGCGTTGTC GAGTTGGCAA TGGGTCTTCT GGGTGCATGC GCTGCTCGCG GTCGTGACCT TGATGCTCGT TTTCAGCGGC GTGCAGGAAT CGCGCGACCC GCATGCGCAT ACGCTCGACG TTGCCGGCAT CGTCACGTTG TCGTTGGCGG TGTTCGGGCT CGTGTATTTC ATCACGCAGG TTCCGGCGCT TGGATTCAGC AATCCGCGTG CACTCTTCAT TATCGCGGCA ACGTTGGTCG CATTCGTGGC CTTTCTGTTT GCCGAGAGAC TCAATACGCG GCCCATGTTC GACTTTTCAG TGTTCAGGAT TCCGCAGTTT TCCGGCGCAC TGATGGGCTC GGCGGGCATG AACTTCAGCT TCTGGCCGTT CATGATCTAT CTGCCGATCT ATTTCCAGAT CGGCCTCGGC TACGACAGCG TGAGCGCCGG ACTGGCGTTG CTCGCTTACA CGCTGCCAAC GCTTCTCTTT CCGCCGCTCG GCGAACGTCT CGCACTGCGT TACGGCTCGG GAATCGCCAT ACCTGCCGGC CTGTTTACGA TCGGCCTCGG CTTCATGCTG ATGCGTTACG GTAGCGGCGC CGCGCATGCC GACCTATGGA CCTTGTTGCC CGGTTGCATG ATAGCGGGCG CGGGCCTCGG TCTCACCAAT ACGCCCGTCA CCAATACGAC CACAGCCGCG GTTCCCGCGG AACGGGCGGG CATGGCGTCG GGCATCGATA TGAGTGCGCG GATGATTACG CTCGCGATCA ACATCGCGTT GATGGGTGCA ATCCTGGTCG GCGGAATTCT TGCCAGTCTG AAGACGCGCT TGCCGAAGAC GCTCGACACT GCGCCGCTCG GCAGACTCGC AGAGAAGATT GCGGCGGGCG ATGTCGAAGC AGTCAGAACG GGGATGCCCG CGCTGGCGCA AATCGACCCA TCAGGAAGCG CCGTGCATGC CGCGTTGATG CACGGATTCG GCTGGGTGAT GGTCTACGGC GGAGTCGGCG TGTGGGTGCT TGCCGCGCTC AGTTTCGTGA TATCCGGCAG CGCGTCGAGA AGGCTAAGCG GCGAGAAATG CGCGCCGGCG CAAAAGCAGC AGCATCAACC AGCTCAATGC GACGCGTGTA GCTAG
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Protein sequence | MSHDPIAPPR REEWRSTNAA VGHQPTSHEA HRAGAVASDK TPQSATFLSL RKNTLALGAV CLASLMFGLE ISSVPVILPT LERVLHGDFK GMQWIMNAYT LAVTTVLMAT GTLADRFGRR RIFVVGIALF GITSLICGLA QSVPTLIVAR LLQGASGGAM LICQVAVLSH QFNEGPERAR AFSAWGIIFG IGLGFGPIIG GAIVALSSWQ WVFWVHALLA VVTLMLVFSG VQESRDPHAH TLDVAGIVTL SLAVFGLVYF ITQVPALGFS NPRALFIIAA TLVAFVAFLF AERLNTRPMF DFSVFRIPQF SGALMGSAGM NFSFWPFMIY LPIYFQIGLG YDSVSAGLAL LAYTLPTLLF PPLGERLALR YGSGIAIPAG LFTIGLGFML MRYGSGAAHA DLWTLLPGCM IAGAGLGLTN TPVTNTTTAA VPAERAGMAS GIDMSARMIT LAINIALMGA ILVGGILASL KTRLPKTLDT APLGRLAEKI AAGDVEAVRT GMPALAQIDP SGSAVHAALM HGFGWVMVYG GVGVWVLAAL SFVISGSASR RLSGEKCAPA QKQQHQPAQC DACS
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