| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4071 |
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| Symbol | |
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| ID | 6278874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 88236 |
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| End bp | 90002 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642615172 |
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| Product | cyclic peptide transporter |
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| Protein accession | YP_001887825 |
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| Protein GI | 187918794 |
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| COG category | [P] Inorganic ion transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.324358 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTG CCAACGAGCG CTACGACGCG CCACCCTCGT CTGCTTCACC TCCCTCTAAC
TCCGCGGGCA AGCCCGCCAT GCGCCTGATC GTCGCGCTGC TCAAGCGCTC TCGCGGTTCC
TTCGCGATCG CGCTGACCGC GTGCGTGCTG AACGGCATCG CCAGCGTGCT GCTCGTCGCG
ACCTTGAGCC GCGCCCTGTC GCAAACAGGC GTCGCCGATC TGTCGCTCGC CTTGCGTTTC
GCGGTGTGCG CGATCGTCGC GCTCGTCACA CGCGTTATCA CTGGCGTGCT GTTCGCGCGC
CTCTCGCAGG ACACGATGGC GCAGTTGCGT GAGCACGTCG CGCGACGTGT CGCCGAGGCC
GAGTTGCGCG ATGTCGAACG GATCGGCGCG GCGCCCGTGC AGTCCGTGCT CACCGACGAC
GCCACCAACG TGTCGATGCT GTTCTTTGCG CTGCCCAATC TGGTGATGCA CGGCTCGATT
GTGTTCGGCT GCCTCGGTTA TCTGGCGTGG CTGTCGTGGC CTGTTTGCCT GCTTGCGGTC
GCCGCGATCC TGGTCGGCTC GTTCGGTTAT CACGCCGGCG ACAAGCGCGC GATCGCTTCG
CTCGAAGCAG CAGGCCGTTC GCAGGACAAA CTGTTCGGCT ATCTCGGCGC GCTCTTCACG
GGCGCGAAGG AACTGAAGCT GCATCAGGCG CGTTCGCGTC AATTCGTGGA CGGCCAGCTC
GGCTCGGCCA TCGACGAAGT GCGCGATCAT CGGCGCCGCG CATTCAGCGC GTATGCAGTC
GGGGTCGGCT GGATCGTGTT CCTGTTCTAT GTGTTCCTGG GCGTCGCGGC ATTCTGGCCG
GCACTCGGCG TGCACGCGGA TGCGCCGTCG GCATCGGGCT ATGTGGTGGT GTTCCTGTTC
ATGCTGCTGC CGCTGGACGG CCTGCTCAAC AACGTGCCGA CATTGAATGC GGCGCGCGTC
TCGCTCGATC GCATCGAGAA GGTGATGGGC GAATTCGGCG CGCTGCGCAC CTCGCCGCCG
CCCGACGAAA ATGCTTCGCA TGCGCCGTAT CGCACGCTCA CGCTCAGCAA CGTCACGCAC
TCGTACTTTC ATGAGCGCGA CGAGCGGATG TTCCGAGTCG GGCCGGTCAA TCTGACTTTC
AGGCCGGGTG AGCTGGTGTT CATCGTCGGC GGCAACGGCA GCGGCAAGAC GACGCTCGCG
AAAGTGCTGA CCGGTCTCTA CGAACCCGAA GACGGCACGA TCGAATTGGA CGGCAAGCGG
GTCGGCTTTG CTGAACGCGC CGCGTATCGG CAGCGCTTCA CGGCTGTGTT CAACGACTTC
CATCTGTTCG ACGCGCTGCT TGGCATCGTC GATCCGAACG ATGCCTCGCG CGCACAGGCG
GATGCCCGCG CCAACGCGCT GGTTGCAAAG CTTGCGCTCG ATCACAAGGT GCAGGTCGTG
AACGGCGCGT TCTCTACGCG GGCGCTTTCC ACCGGTCAGC GCAAACGCCT CGCGCTGGTG
GTCGCGTATC TGGAAGACCG GCCGTTCTAT CTGTTCGACG AATGGGCCGC CGATCAGGAC
CCGCAGTTCA AAGCGGTGTT CTACGAGCAA CTGCTGCCGG AGTTGCGCTC GCGCGGCAAG
ACCGTGCTGG TGATCAGCCA CGACGACCGT TACTTCCATC TCGCGGATCG TGTGTTGAAG
CTGGAAAATG GCAGTATCGT GAGTGAGACG CATGGTTCGG CACAGGCAGT GCAAAGCCCG
GCGGTGGCCA ACGGTACGAT GGGGTGA
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| Protein sequence | MTAANERYDA PPSSASPPSN SAGKPAMRLI VALLKRSRGS FAIALTACVL NGIASVLLVA
TLSRALSQTG VADLSLALRF AVCAIVALVT RVITGVLFAR LSQDTMAQLR EHVARRVAEA
ELRDVERIGA APVQSVLTDD ATNVSMLFFA LPNLVMHGSI VFGCLGYLAW LSWPVCLLAV
AAILVGSFGY HAGDKRAIAS LEAAGRSQDK LFGYLGALFT GAKELKLHQA RSRQFVDGQL
GSAIDEVRDH RRRAFSAYAV GVGWIVFLFY VFLGVAAFWP ALGVHADAPS ASGYVVVFLF
MLLPLDGLLN NVPTLNAARV SLDRIEKVMG EFGALRTSPP PDENASHAPY RTLTLSNVTH
SYFHERDERM FRVGPVNLTF RPGELVFIVG GNGSGKTTLA KVLTGLYEPE DGTIELDGKR
VGFAERAAYR QRFTAVFNDF HLFDALLGIV DPNDASRAQA DARANALVAK LALDHKVQVV
NGAFSTRALS TGQRKRLALV VAYLEDRPFY LFDEWAADQD PQFKAVFYEQ LLPELRSRGK
TVLVISHDDR YFHLADRVLK LENGSIVSET HGSAQAVQSP AVANGTMG
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