| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4033 |
|---|
| Symbol | |
|---|
| ID | 6280107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 48178 |
|---|
| End bp | 49041 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642615136 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001887789 |
|---|
| Protein GI | 187918758 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.753159 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACTA CCCCTCAACA GATGATGCCC TCGGGCATCG ACGCCGCATC GCTCGCCCAT
GTCGAACGTG TAGCGCAAAA ACGCATCCGG CAGCGTCACG CGCTAGTGAT CTCGCTGCGT
ATCGTCGTGC TGGTGGTCGT ACTCGGCGGG TGGGAACTGT CCGCGCGCCT GAAGTGGATC
GACCCGTTCT TCTTCTCGAT GCCGAGCGCG ATTTTCGACC AGATCATCGA CTGGTTCGTG
AACGGCACCT CGCAAGGTCC GCTGCTGACG CAAGTGTGGG TCACGCTCGA AGAAACCGGG
CTCGGCTTCA TTATCGGTTC GGTCGCCGGT GTGTTCTGCG GCATCGTGCT CGGGCGCAAC
AAGCTGCTCT CCGACGTCTT CAGTCTCTAC ATCAAAATCG CCAACTCGAT TCCGCGTGTG
GTGCTCGGTT CGGTGTTCGT GATTGCGCTG GGTTTGGGCA TGGCGTCGAA GGTGGCGCTG
GCGGTGGTGA TGGTGTTCTT CGTCGTGTTC GCTAACGCTT TCCAGGGCGT GCGTGAAGCC
GATCGCTTCA TGATCGCGAA TGCGCAGATT CTCGGCGCGT CGCGCCGTCA GGTGACAACC
TCGGTGGTGA TCCCGTCGGC ATTGAGCTGG ATTCTCGCGA GCTTGCACGT GAGCTTCGGA
TTCGCGCTGG TCGGTGCGGT GGTGGGCGAG TTCCTCGGCT CAAAGCAAGG TATCGGACTG
TTGATCTCGA CTGCGCAAGG CGCGTTTAAC GCAAGCGGGG TGTTCGCCGC GATGATTGTG
TTGGCCGTCG TCGCACTGGC AGCGGACTAT CTGTTGACCG CGGTCGAACA GCGGCTGTTG
AAGTGGCGGC CGACTGCGGT TTGA
|
|---|
| Protein sequence | MSTTPQQMMP SGIDAASLAH VERVAQKRIR QRHALVISLR IVVLVVVLGG WELSARLKWI
DPFFFSMPSA IFDQIIDWFV NGTSQGPLLT QVWVTLEETG LGFIIGSVAG VFCGIVLGRN
KLLSDVFSLY IKIANSIPRV VLGSVFVIAL GLGMASKVAL AVVMVFFVVF ANAFQGVREA
DRFMIANAQI LGASRRQVTT SVVIPSALSW ILASLHVSFG FALVGAVVGE FLGSKQGIGL
LISTAQGAFN ASGVFAAMIV LAVVALAADY LLTAVEQRLL KWRPTAV
|
|---|
| |