| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4008 |
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| Symbol | |
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| ID | 6278097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 21339 |
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| End bp | 22217 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642615111 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_001887764 |
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| Protein GI | 187918733 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACCGT ACCTTCCATT GAACGCCTTG CGCGCCTTTG AATCGTCCGC CCGGCATCTG
AGCTTCACGC GCGCGGCATT CGAACTGAAC GTCACGCAGG CCGCCGTCAG CCAGCAGGTC
AGAACGCTAG AAGAACGACT GGGCACCGCG CTTTTCAAGC GTCTACCACG CGGTCTCGCC
ATGACCGACG AGGGCCTCGC ACTGCGTCCG GTGCTGACCG ACGCATTCGA TCGCATTGAA
GCCGTGCTTA AACAATTTGA AGGCGGCCAC TTTCACGAGG TGCTGACGGT GGGCGTGGTC
GGTACGTTTG CGGTTGGCTG GCTGATGCCG CGCCTCAAGT CGTTTCGCGA CGCGCATCCG
TTCGTGGAAT TGCGGCTACT GACGAACAAC AACCTGGTCG ATCTCGCCAC CGAAGGCCTC
GATTTCGCGA TCCGTTTCGG CGACGGCACG TGGCCCGGTT CGCTCGCGAC CCGCCTGCTC
GACGCGCCAC TCGCGCTGCT CTGCACACCG GAGATTGCCG AGCGCCTAAC GAAACCGGAG
GATCTCGCCG GCGAAACCTT GCTGCGCTCC TATCGCACCG ACGACTGGAT GAGCTGGTTC
AGCGCCGCGG GCATTCCGCC GCGGCCGATT CGCGGGCCGG TGTTCGATTC GTCTCGGCTG
ATGGTGGAAG CGGCGATGCA GGGTGCGGGT ATCGCGCTCG CGCCCGCGCT GATGTTCGAT
CACGAGATCA ATACAGGCAG GCTGGTGCGC CCGTTCGATG TGGAGGTTCA CGCCGGCAGT
TACTGGCTGA CATGGCTGAA GGGCAAACCC ATGACGCCGG CGATGCTGCT GTTCAATCAA
TGGATCATCA AGGAAGCGTC GGCACAGACG CAGAACTAG
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| Protein sequence | MRPYLPLNAL RAFESSARHL SFTRAAFELN VTQAAVSQQV RTLEERLGTA LFKRLPRGLA
MTDEGLALRP VLTDAFDRIE AVLKQFEGGH FHEVLTVGVV GTFAVGWLMP RLKSFRDAHP
FVELRLLTNN NLVDLATEGL DFAIRFGDGT WPGSLATRLL DAPLALLCTP EIAERLTKPE
DLAGETLLRS YRTDDWMSWF SAAGIPPRPI RGPVFDSSRL MVEAAMQGAG IALAPALMFD
HEINTGRLVR PFDVEVHAGS YWLTWLKGKP MTPAMLLFNQ WIIKEASAQT QN
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