Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3917 |
Symbol | |
ID | 6283326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 4388532 |
End bp | 4390070 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642623504 |
Product | methylmalonate-semialdehyde dehydrogenase |
Protein accession | YP_001897528 |
Protein GI | 187925886 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGA CATATCAGGA CGAAACCCAA CGCAGCGCGA CCAGCGCCCG CGCGCTGACC CATTTCATCA ACGGCAAGAC GTTCGAGGGC ACGAGCGGCC GTTTCGGCGA CGTCTTCAAT CCCGCGCAAG GCAGCGTGAG CGCGCGCGTG CCGCTGGCGA GCGTCGCCGA GGTCGATGCG GCCGTCGCCG CCGCCAAGGC CGCGTTTCCC GCGTGGAGTG AAACCGCGCC GATCAAGCGC GCGCGAGTCC TGTTCAAGTT CAAGGAACTG CTCGACCGTC ACCACGACGA ACTCGCGGAA CTGATCACGC GCGAGCACGG CAAGGTGTTT TCGGATGCGA AGGGCGAGGT AATGCGCGGC ATCGAGATCG TCGAGTTCGC GTGCGGCATT CCGAATCTGT TGAAGACCGA CTTCACCGAT CAGATCGGCG GCGGCATTGA CAATTGGAAT TTGCGTCAGC CGCTCGGCGT GGTCGCAGGC ATTACGCCGT TTAACTTCCC GATGATGGTG CCGTGCTGGA TGTTCCCCGT AGCGATTGCA TGCGGCAACA CGTTCGTGCT GAAGCCATCT GAGCGCGATC CGTCCTGTTC GAATCGTCTC GCGGAATTGC TGAAGGAAGC CGGCTTGCCG GACGGCGTCT TCAACGTGGT GCACGGCGAT AAGGTCGCTG TCGATGCATT GCTCGTGCAT CCGGAAGTCA GCGCATTGTC GTTTGTCGGT TCGACGCCGA TTGCCGAATA CATCTACACG GAAGGCACGA AGCACGGCAA GCGCGTGCAG GCATTGGGCG GAGCGAAGAA TCATCTGGTG GTGATGCCGG ACGCGGATCT CGACCAGGCG GTGGATGCCT TGATCGGCGC GGCGTACGGT TCGGCGGGCG AGCGTTGCAT GGCGATTTCG GTGGCGGTGG CAGTGGGTCA TATCGCCGAC GAACTGATCG AGCGACTCAC GCCGCGTGTG AAGAGTTTGA AGATTCTCAA CGGCATGGAA TCAGATGCCG AGATGGGGCC GCTGGTGACC GCGGTACATC GCGAGAAAGT GGTCGGCTAT ATCGATTCGG GCGTCGAGGC GGGCGCGAAG CTGGTGGTCG ATGGGCGCGG CCATCAGGTC AGTGGCCATG AGAAGGGCTT CTTTCTCGGC GGCACCTTGT TCGACAATGT CTCGACCGAC ATGAAGATTT ATCGCGAAGA GATTTTCGGA CCCGTGCTCT GCGTAGTGCG CGTGCCGGAT TTTGCGTCAG CGGTGGAACT GATCAACGCC AACGAGTTTG CTAACGGCGT GTCGCTGTTT ACGTCCGATG GCGGCGTTGC TCGCGCTTTC TCGCGGCAGA TTCAGATCGG CATGGTGGGC ATCAACGTGC CGATTCCCGT GCCGATGGCG TGGCATTCGT TTGGCGGCTG GAAGAAGTCG CTGTTCGGCG ATCATCACGC GTATGGTGAG GAGGGCGTAC GGTTCTATAC GCGCTACAAG AGCATCATGC AGCGCTGGCC CGACAGTATC GCCAAGGGTG CTGAATTCAC GATGCCAGTG GCCAAGTAG
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Protein sequence | MSETYQDETQ RSATSARALT HFINGKTFEG TSGRFGDVFN PAQGSVSARV PLASVAEVDA AVAAAKAAFP AWSETAPIKR ARVLFKFKEL LDRHHDELAE LITREHGKVF SDAKGEVMRG IEIVEFACGI PNLLKTDFTD QIGGGIDNWN LRQPLGVVAG ITPFNFPMMV PCWMFPVAIA CGNTFVLKPS ERDPSCSNRL AELLKEAGLP DGVFNVVHGD KVAVDALLVH PEVSALSFVG STPIAEYIYT EGTKHGKRVQ ALGGAKNHLV VMPDADLDQA VDALIGAAYG SAGERCMAIS VAVAVGHIAD ELIERLTPRV KSLKILNGME SDAEMGPLVT AVHREKVVGY IDSGVEAGAK LVVDGRGHQV SGHEKGFFLG GTLFDNVSTD MKIYREEIFG PVLCVVRVPD FASAVELINA NEFANGVSLF TSDGGVARAF SRQIQIGMVG INVPIPVPMA WHSFGGWKKS LFGDHHAYGE EGVRFYTRYK SIMQRWPDSI AKGAEFTMPV AK
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