Gene Bphyt_3915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3915 
Symbol 
ID6283324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4385603 
End bp4386382 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content59% 
IMG OID642623502 
ProductABC transporter related 
Protein accessionYP_001897526 
Protein GI187925884 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTCG GCGATACGAT TCTCGAAACG CGCGGCCTCA CCCGTGAGTT CAAAGGCTTC 
ATCGCCGTGA ACGGTGTGAA CCTGCGCGTG CGCCGTGGCT CAATCCATGC GCTCATCGGC
CCGAATGGGG CAGGCAAGAC CACCTGTTTC AATCTGCTCA CCAAATTTCT GGAACCCACT
GCGGGCCAGA TCGTTTTCAA CGGCATCGAC ATCACGGGCG AACGCCCGGC GCAAATCGCG
CGGCGCGGCA TTATCCGTTC GTTCCAGATT TCCGCGGTGT TTCCGCATCT GACAGCATTG
CAGAATGTGC GCATCGGTTT GCAGCGCCAG CTCGGCACGG CATTTCATTT CTGGAAGAGC
GAACGCACGC TGCGCCAACT TGATGATCGC GCAATGGATT TGCTCACCCA GGTCGGACTG
ACCGATTTCG CCGACGTGTT GACGGTCGAA CTTTCCTACG GCCGCAAACG CGCGTTGGAA
ATTGCCACCA CGCTCGCCAT GGAACCGGAG CTCATGTTGC TCGACGAGCC GACGCAAGGC
ATGGGCCATG AAGACGTCGA TCGCGTGACG GCGTTGATCA AAAAAGTATC GAGCGGCCGC
ACCATTCTGA TGGTCGAGCA CAACATGAAT GTGATCGCCG GCATCTCCGA CACGATTACG
GTGCTGCAAC GAGGCGAAGT ACTCGCCGAA GGCAGCTACG CCGAAGTGTC GAAGAATCCG
CTCGTGATGC AAGCCTATAT GGGCAGCGCC GACGCGGCGC TCGCCGGAGC CCACGCATGA
 
Protein sequence
MILGDTILET RGLTREFKGF IAVNGVNLRV RRGSIHALIG PNGAGKTTCF NLLTKFLEPT 
AGQIVFNGID ITGERPAQIA RRGIIRSFQI SAVFPHLTAL QNVRIGLQRQ LGTAFHFWKS
ERTLRQLDDR AMDLLTQVGL TDFADVLTVE LSYGRKRALE IATTLAMEPE LMLLDEPTQG
MGHEDVDRVT ALIKKVSSGR TILMVEHNMN VIAGISDTIT VLQRGEVLAE GSYAEVSKNP
LVMQAYMGSA DAALAGAHA