Gene Bphyt_3914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3914 
Symbol 
ID6283323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4384848 
End bp4385606 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content63% 
IMG OID642623501 
ProductABC transporter related 
Protein accessionYP_001897525 
Protein GI187925883 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGA TTGCCGAGCG TGAAAGCCTC GACGTAAGCG GAACGGAGAA CGCCGTTCCC 
GCGCTGGACA TCAAGGGTTT GCAGGCGTGG TATGGGGAGT CCCATATTCT CCATGGGTTC
GATCTGACGG TGAACCGCGG CGAGGTCGTC ACGCTGCTGG GCCGCAACGG CGCGGGACGC
ACGACCACGC TGCGCGCCAT CATGGGCCTG ACCGGGCGGC GCACCGGTTC GATCCGCATT
GGCGGACGCG AAACCATCAA TCTGCCCACG CATCGCATCG CGCATTGCGG CGTGGGCTAC
TGCCCGGAAG AACGGGGTAT CTTTTCGAGC CTCTCGTGCG AGGAAAACCT GCTGCTGCCG
CCGCCCATCG GCGACAAGGC GCACATGATG TCGCTCGAAG AAATCTATTC GATGTTCCCG
AATCTGCAGG AGCGCCGCGC GAGCCAGGGC ACGCGGCTAT CCGGCGGTGA ACAGCAGATG
CTGGCCGTGG CGCGCATTCT GCGCACCGGC GCGAGTCTGC TGCTGCTCGA CGAGATATCG
GAAGGGCTCG CGCCTGTCAT CGTGCAGGCG CTGGCGCGCA TGATCATGAC ACTCAAGGCG
CGGGGCTATA CCGTCGTGAT GGTCGAACAG AATTTTCGTT TTGCCGCGCC GCTGGCGGAC
CGCTTCTATG TGATGGAGCA CGGCGCGATT GTCGAGCACT TCGGGGCGAG TGAACTCGAA
AGCAAGATGC CGGTCCTGCA CGATCTACTG GGCGTATAA
 
Protein sequence
MNTIAERESL DVSGTENAVP ALDIKGLQAW YGESHILHGF DLTVNRGEVV TLLGRNGAGR 
TTTLRAIMGL TGRRTGSIRI GGRETINLPT HRIAHCGVGY CPEERGIFSS LSCEENLLLP
PPIGDKAHMM SLEEIYSMFP NLQERRASQG TRLSGGEQQM LAVARILRTG ASLLLLDEIS
EGLAPVIVQA LARMIMTLKA RGYTVVMVEQ NFRFAAPLAD RFYVMEHGAI VEHFGASELE
SKMPVLHDLL GV