| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3909 |
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| Symbol | |
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| ID | 6284709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4378322 |
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| End bp | 4379482 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642623496 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_001897520 |
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| Protein GI | 187925878 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA CAAAGCAGTG GGTTCGCACC GGCATTGCCA TGGCGTTGAT GTGCAGTGCG
GGCGCGGCGT TCGCTCAGGT GAAGATCGGC GTGACGCTTT CTACTACGGG GCCGGCCGCA
TCGCTCGGGA TTCCTGAAAA GAATACGATT GCGCTGCTGC CGAAAGAGAT CGGCGGCAAG
ACCGTGCAGT ACATCATTCT CGACGACGCA TCCGATACCG GCAAAGCCGT GCAGAACACG
CGCAAGCTGA TCGACGAAGA CCACGTCGAC GCGATCATCG GTTCGACCGT TACGCCGAAT
TCGCTCGCCA TGCTCGACGC CGCTGCCGAA GGCAAGACGC CGGTGATCTC GCTGGCGGCA
TCGGCGGCGA TCATTTCGCC GATGGACGCG AAGCGCGCAT GGGCCTTCAA ACCGCCGCAA
AACGACAGCC TGATGGCCGA CGCCATCGCC GATTACATGG AGCATCACGG CGTGAAAACG
GTGGGCTTCA TCGGCTTCGC GGATGCCTAC GGCGACGGCT GGAACAACGT CTTCACCGCG
GCGGCCGCGG CACACAATCT GAAGATCGTC TCGAACGAGC GCTTTAACCG CACCGATGCA
TCGGTGACGG GTCAGGTGCT GAAGACGATG GGCGCGAATC CCGACGCGGT GCTGATCGCG
GGCGCGGGCA CGCCGTCGGC GCTGCCGGCC AAGACGCTCA AGGAGCGCGG CTACAAGGGC
AAGGTCTATC AGACGCACGG CGTCGCCAAC AACGACTTCC TGCGCGTGTG CGGCAAAGAT
TGCGAAGGCG AATTCCTGCC GGCTGGCCCG ATCCTCGTGG CGGATCAACT GCCTGACTCG
AACCCGGTGA AGAAGTCGTC GCTGGCCTAT AAAGCGGCTT ACGAGAAAAC ATATGGCGCG
GGCTCGGTTG CGACCTTCGG CGGTCACGCA TGGGACGCCG GCCAAATGCT GCAAGCAGCG
ATTCCGGTCG CGCTGAAGAC CGCTCAGCCG GGCACGGAAC AGTTCCGCGT GGCACTGCGT
GGCGCGCTCG AGAACATCAA GGAACTGCCG GTTTCGCACG GCATCATGAA CACCACCCCG
ACCGACCACA ACGGCCTCGA CAAGCGCGCA CGCGTGATCG TGCAGATCGT CGACGGCAAG
TGGAAGCTGC AGAACGAGTA A
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| Protein sequence | MKKTKQWVRT GIAMALMCSA GAAFAQVKIG VTLSTTGPAA SLGIPEKNTI ALLPKEIGGK
TVQYIILDDA SDTGKAVQNT RKLIDEDHVD AIIGSTVTPN SLAMLDAAAE GKTPVISLAA
SAAIISPMDA KRAWAFKPPQ NDSLMADAIA DYMEHHGVKT VGFIGFADAY GDGWNNVFTA
AAAAHNLKIV SNERFNRTDA SVTGQVLKTM GANPDAVLIA GAGTPSALPA KTLKERGYKG
KVYQTHGVAN NDFLRVCGKD CEGEFLPAGP ILVADQLPDS NPVKKSSLAY KAAYEKTYGA
GSVATFGGHA WDAGQMLQAA IPVALKTAQP GTEQFRVALR GALENIKELP VSHGIMNTTP
TDHNGLDKRA RVIVQIVDGK WKLQNE
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