Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3908 |
Symbol | |
ID | 6284708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 4377062 |
End bp | 4378117 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642623495 |
Product | inner-membrane translocator |
Protein accession | YP_001897519 |
Protein GI | 187925877 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATCTAT CAATTGCGGC GATCCTCGCG CAGGACGGCA TCACCACCGG CGCGATCTAC GCGCTGCTCG CGCTCGCGCT GGTGCTGGTG TTCTCCGTGA CGCGGGTGAT CTTCATCCCG CAGGGGGAGT TTGTTTCGTA CGGCGCGTTG ACGCTCGCCG CACTGCAGAC TCAGAAATTT CCGGCCACCT GCTGGTTGCT GATGGCGATG GGCGCGGCCT GCTTCGTGGT CGAGATAGCG GGGCTGGTGC GGCATCCCGA ACGGCGCCGG CATGCGGCGC GCACGCTGGT CATGCTGGTC GGCAAATATC TGCTGTTTCC GATCGCGGTC TACGCGCTCA CGCAAGGCGT GTTCATGCAT ACGCTGCCGA TGATCGCGCA GATCGCGTTG ACGCTGTTGA TCGTGATTCC GATGGGCCCG TATGTGTACC GGCTTGCGTA TGAGCCGATC GCGGAAGCGA CCACGCTGCT GCTGTTGATC GTGGCGGTGG CGGTGCACTT CGCGATGGTC GGCCTGGGTC TCGTGATGTT CGGCGCGGAA GGTTCGCGCA CTACCGCGTT TTCCGACGCG ACCTTCAACA TCGGCACGCT GACGATTTCC GGGCAAAGCC TGTGGGTGGT CGGCACGGCG GTGGTGTTGA TCGGCGCGCT GTATCTTTAC TTCGATCGCT CGATCTCGGG TAAGGCGTTG CGTGCGACGT CGGTGAACCG GCTCGGCGCG CGGCTCGTCG GCATCGGCAC GACGCAAGCG GGGCGCCTCG CGTTCACGCT GGCGGCGGGC CTCGGCGCAC TGTGCGGCAT TCTCGTCGCG CCCTTGACCA CCATCTACTA CGACTCGGGC TTCCTGATCG GTTTGAAGGG CTTTGTGGGG GCGATTATCG GCGGACTCGT CAGCTATCCG CTGGCTGCCG CGGGCTCGAT TCTGGTGGGC CTGCTGGAGT CGTATTCGTC GTTCTGGGCG AGCGCTTATA AGGAAGTGAT CGTGTTCACG CTGATCATCC CCGTGTTGCT CTGGCGGAGT CTTGCCAGCC CGCACGCCGA AGAGGAAGAG GAGTGA
|
Protein sequence | MDLSIAAILA QDGITTGAIY ALLALALVLV FSVTRVIFIP QGEFVSYGAL TLAALQTQKF PATCWLLMAM GAACFVVEIA GLVRHPERRR HAARTLVMLV GKYLLFPIAV YALTQGVFMH TLPMIAQIAL TLLIVIPMGP YVYRLAYEPI AEATTLLLLI VAVAVHFAMV GLGLVMFGAE GSRTTAFSDA TFNIGTLTIS GQSLWVVGTA VVLIGALYLY FDRSISGKAL RATSVNRLGA RLVGIGTTQA GRLAFTLAAG LGALCGILVA PLTTIYYDSG FLIGLKGFVG AIIGGLVSYP LAAAGSILVG LLESYSSFWA SAYKEVIVFT LIIPVLLWRS LASPHAEEEE E
|
| |