Gene Bphyt_3908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3908 
Symbol 
ID6284708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4377062 
End bp4378117 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content64% 
IMG OID642623495 
Productinner-membrane translocator 
Protein accessionYP_001897519 
Protein GI187925877 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTAT CAATTGCGGC GATCCTCGCG CAGGACGGCA TCACCACCGG CGCGATCTAC 
GCGCTGCTCG CGCTCGCGCT GGTGCTGGTG TTCTCCGTGA CGCGGGTGAT CTTCATCCCG
CAGGGGGAGT TTGTTTCGTA CGGCGCGTTG ACGCTCGCCG CACTGCAGAC TCAGAAATTT
CCGGCCACCT GCTGGTTGCT GATGGCGATG GGCGCGGCCT GCTTCGTGGT CGAGATAGCG
GGGCTGGTGC GGCATCCCGA ACGGCGCCGG CATGCGGCGC GCACGCTGGT CATGCTGGTC
GGCAAATATC TGCTGTTTCC GATCGCGGTC TACGCGCTCA CGCAAGGCGT GTTCATGCAT
ACGCTGCCGA TGATCGCGCA GATCGCGTTG ACGCTGTTGA TCGTGATTCC GATGGGCCCG
TATGTGTACC GGCTTGCGTA TGAGCCGATC GCGGAAGCGA CCACGCTGCT GCTGTTGATC
GTGGCGGTGG CGGTGCACTT CGCGATGGTC GGCCTGGGTC TCGTGATGTT CGGCGCGGAA
GGTTCGCGCA CTACCGCGTT TTCCGACGCG ACCTTCAACA TCGGCACGCT GACGATTTCC
GGGCAAAGCC TGTGGGTGGT CGGCACGGCG GTGGTGTTGA TCGGCGCGCT GTATCTTTAC
TTCGATCGCT CGATCTCGGG TAAGGCGTTG CGTGCGACGT CGGTGAACCG GCTCGGCGCG
CGGCTCGTCG GCATCGGCAC GACGCAAGCG GGGCGCCTCG CGTTCACGCT GGCGGCGGGC
CTCGGCGCAC TGTGCGGCAT TCTCGTCGCG CCCTTGACCA CCATCTACTA CGACTCGGGC
TTCCTGATCG GTTTGAAGGG CTTTGTGGGG GCGATTATCG GCGGACTCGT CAGCTATCCG
CTGGCTGCCG CGGGCTCGAT TCTGGTGGGC CTGCTGGAGT CGTATTCGTC GTTCTGGGCG
AGCGCTTATA AGGAAGTGAT CGTGTTCACG CTGATCATCC CCGTGTTGCT CTGGCGGAGT
CTTGCCAGCC CGCACGCCGA AGAGGAAGAG GAGTGA
 
Protein sequence
MDLSIAAILA QDGITTGAIY ALLALALVLV FSVTRVIFIP QGEFVSYGAL TLAALQTQKF 
PATCWLLMAM GAACFVVEIA GLVRHPERRR HAARTLVMLV GKYLLFPIAV YALTQGVFMH
TLPMIAQIAL TLLIVIPMGP YVYRLAYEPI AEATTLLLLI VAVAVHFAMV GLGLVMFGAE
GSRTTAFSDA TFNIGTLTIS GQSLWVVGTA VVLIGALYLY FDRSISGKAL RATSVNRLGA
RLVGIGTTQA GRLAFTLAAG LGALCGILVA PLTTIYYDSG FLIGLKGFVG AIIGGLVSYP
LAAAGSILVG LLESYSSFWA SAYKEVIVFT LIIPVLLWRS LASPHAEEEE E