| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3904 |
|---|
| Symbol | gidB |
|---|
| ID | 6281862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 4371698 |
|---|
| End bp | 4372381 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642623491 |
|---|
| Product | 16S rRNA methyltransferase GidB |
|---|
| Protein accession | YP_001897515 |
|---|
| Protein GI | 187925873 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
|---|
| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTGA GCGAGAAGGG AAGCGGTAGG GACGCGTTGG CGCCGCTACT GGCGGATGGT
GTCCGCGAGC TCGGCCTTGA TTTGAGCGAC GCGCAGCTGG ACAAACTGCT CGACTATGTC
GCGTTGCTGT CGAAGTGGAA TGCCGTCTAC AACCTCACGG CAATTCGCGA CCCGCGCCAG
ATGCTGATTC AGCACATCCT GGATTCGCTT TCGATCGTGC CGCACCTCGC GCCGCTAGGT
CCGTCCTCAG TACTCGATGT CGGCTCGGGC GGCGGCCTGC CGGGCATCGT GCTGGCGATT
GTCCTGTCGG AATGGACCGT CACCGTGAAC GACATCGTTC ACAAAAAGAC GGCTTTTCAG
GCGCAGGCCA AGGCCGAACT CGGCCTTGCG AATCTGTCCG TGGTGACCGG CCGGGTCGAG
ACTTTGCAGC CGGGCGCCGA AGTACCGGCA AAGTTCGACG TAATTGTCTC GCGCGCATTC
GCAGAGCTCG CGGATTTCGT TACACTGGCC CGTCATCTGG TTGCGGAGCA GGGTGCGATC
TGGGCCATGA AAGGCGTGCG CCCGGACGGC GAGATCGAGC GCTTGCCGGT GGGTGCCCAC
GTGGAACAGA TTATTCGGTT GAACGTGCCG TCGCTAGATG CGGAGCGACA TCTGATCAAA
GTTTTGGTGG ATGCCGGCAG CTAG
|
|---|
| Protein sequence | MTVSEKGSGR DALAPLLADG VRELGLDLSD AQLDKLLDYV ALLSKWNAVY NLTAIRDPRQ
MLIQHILDSL SIVPHLAPLG PSSVLDVGSG GGLPGIVLAI VLSEWTVTVN DIVHKKTAFQ
AQAKAELGLA NLSVVTGRVE TLQPGAEVPA KFDVIVSRAF AELADFVTLA RHLVAEQGAI
WAMKGVRPDG EIERLPVGAH VEQIIRLNVP SLDAERHLIK VLVDAGS
|
|---|
| |