Gene Bphyt_3769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3769 
Symbol 
ID6283200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4220525 
End bp4220860 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content62% 
IMG OID642623356 
Productflagellar hook-basal body complex subunit FliE 
Protein accessionYP_001897381 
Protein GI187925739 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.711308 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTCC CCGTGAACGC GCTTTCGTCG GCGCTGCAAC AGATGCAGTC GATGGCGGCG 
CAAGCGGCCG GCGGCAGCAA TACGGTCGCC GACACGTCCG GCGCGGCGAC GCCCACCGGT
TTTGCGTCGG CACTGAAAGC CTCGCTGGAC AAGATCAGCG GCGATCAGAC CAAGGCGGTC
GGCGAATCGC AGGCGTTCGA ACTCGGCTCG TCGAACGTGT CGCTCAACGA CGTGATGGTC
GACATGCAAA AGGCCAACGT GGGCTTCCAG TTCGGCCTGC AGGTGCGCAA CAAGCTGGTG
TCCGCCTATA ACGACATCAT GCAGATGTCG GTGTGA
 
Protein sequence
MTFPVNALSS ALQQMQSMAA QAAGGSNTVA DTSGAATPTG FASALKASLD KISGDQTKAV 
GESQAFELGS SNVSLNDVMV DMQKANVGFQ FGLQVRNKLV SAYNDIMQMS V