| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3709 |
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| Symbol | |
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| ID | 6281652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4153721 |
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| End bp | 4154872 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642623297 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001897322 |
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| Protein GI | 187925680 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0741295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00542912 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTTTTA AGAAGCTAAA AAAGAACGCC CTCGCAAATC CCGCGTATGT GATGGGGGTC
GCCGCTTCAG CTGCCCTTTT GGGCTTGCCA GCTAAATCAA ACGCGCAAAG TAGTGTCACT
CTTTACGGCA TTGTGGATGT CGGCATTGAA CACCTGAATA ACACGACTTC GGGCGGTGCC
GTGACCCGCG AAGTCTCGGG GAACTCCTCG GGCTCACGCT GGGGCATGAG AGGCGTAGAG
GACTTGGGCG GCGGCCTCAA GGCGCTCTTC GTTCTTGAAA GCGGGTTCAA CGTCAACGAC
GGTACATTGG GCCAGTCAAC CAAAGGTCTC GGTGCGAATG CCACGACCAC CTCGCGACTT
TTCGGTCGAC AGGCATGGGT AGGGCTTGCG TACAACAATC ATCAGTTGAC GTTCGGGCGC
CAAAACTCGC TACTCTTCGA AGAGGCTATC GCATTCGACC CGTTCGGTGC AGCGACGCGT
TACTCGACTC TGTCGGTTGA CTCTGCGTTC GCCGGGCGTA TCGATAACTC CGCGAAGTAT
ACCGGCAAGT TCGGGCCGTT GACCGCAACT GCGATGTACA GTACGCGCTA CGACACGGGC
TACGGTACGG AAGTGCCGGG GGCGGAGCTG ACCGGCCGCT ACTTCGGTGG CACACTCACC
TATGCCACAG GCCCATTCGC TGCGACCGCC GTGTACGAAC AGCGCAACAG CAACACTGCA
GCAACGAACA CCGCCACCGA GCGTCGAGCG TCCGCTGCTG CGTCGTATCA ATTCGGTCAG
GTGAAGGCGT ATGCAGGGTA TCGTTACCTG CGCGCAGCGA GCGCTTTCCT TCCCGCAAGT
CCCATTGCAG TGGCGAACGG CTCGCAAGCC AACGCCGCTA ACATGTATTG GTTTGGCGCC
CAATATTACG TCACGCCGGC GTTTGCCCTT ACGGCGAGCG CGTACTATCA AGACGTTCAC
TCAACGAGTG CAGACCCGTG GCTCGCGGTG CTGTCCGCGG ATTACTTCCT GTCCAAGCGG
ACCGACCTCT ACGCGACGGC GGCCTTTGCG CATAACAAGG GCGGTTCGAC GCTCGGAGTT
GGCGGCTATG GAACCACCTT GGCGAACGAC AACCAGACTG GCGTCGTGGT GGGCATTAGG
CACAAGTTCT AA
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| Protein sequence | MPFKKLKKNA LANPAYVMGV AASAALLGLP AKSNAQSSVT LYGIVDVGIE HLNNTTSGGA
VTREVSGNSS GSRWGMRGVE DLGGGLKALF VLESGFNVND GTLGQSTKGL GANATTTSRL
FGRQAWVGLA YNNHQLTFGR QNSLLFEEAI AFDPFGAATR YSTLSVDSAF AGRIDNSAKY
TGKFGPLTAT AMYSTRYDTG YGTEVPGAEL TGRYFGGTLT YATGPFAATA VYEQRNSNTA
ATNTATERRA SAAASYQFGQ VKAYAGYRYL RAASAFLPAS PIAVANGSQA NAANMYWFGA
QYYVTPAFAL TASAYYQDVH STSADPWLAV LSADYFLSKR TDLYATAAFA HNKGGSTLGV
GGYGTTLAND NQTGVVVGIR HKF
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