Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3674 |
Symbol | |
ID | 6282893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 4118059 |
End bp | 4120341 |
Gene Length | 2283 bp |
Protein Length | 760 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642623263 |
Product | malic enzyme |
Protein accession | YP_001897288 |
Protein GI | 187925646 |
COG category | [C] Energy production and conversion |
COG ID | [COG0280] Phosphotransacetylase [COG0281] Malic enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0789225 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000000707391 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACGAAC AACTTAAGCA AAGCGCTCTC GCATACCACC AGAATCCGAA ACCGGGCAAG ATTTCGGTCA CGCCCACCAA ACCGCTATCG AATCAGCTCG ATCTGTCGCT GGCGTACTCG CCGGGCGTCG CCGCGGCCTG TATGGCGATC TACGACGAAC CGCTCGACGC GCAGAAGTAC ACTTCGCGCG GCAATCTCGT CGGCGTGATC ACGAATGGCA CGGCCGTGCT TGGTCTCGGC AACATCGGCC CGCTCGCCGC GAAGCCGGTG ATGGAAGGCA AGGGTTGTCT CTTCAAGAAG TTCGCCGGCA TCGACGTGTT CGACATCGAA CTCGCCGAGT CCGATCCTGA CAAGCTGGTC GAAGCGATCG CGATGCTCGA GCCGACGCTC GGCGGCATCA ACCTCGAAGA CATCAAGGCG CCCGAGTGCT TCTACATCGA GAAGAAGCTG CGTGAGCGCA TGAAGATTCC GGTCTTCCAC GACGATCAGC ACGGCACGGC GATTATCGCT TCGGCGGCGA TCCTGAACGG CCTGAAAGTG GTCGGCAAGA AGCTCGACGA AGTGAAGCTG GTGTGTTCGG GCGCGGGCGC TGCGGCAATC GCCTGTCTGG ACCTGCTGGT GAATCTGGGC CTGTCGAAGA AGAACGTTCT CGTCACCGAC TCCAAGGGCG TGATCTACGA AGGCCGCGGC AACCTCGATC CGTCGAAGGA ACGCTACGCG GCGAACACCG AAGCGCGCAC GCTTGCTGAC GCGATCCGCG GCGCGGATGT GTTCCTCGGT TGCTCGAGCG CAGGTGTGCT GAAGCCGGAG ATGGTCGCCG AAATGGGCAC GCAGCCGTTG ATTCTCGCGC TGGCGAACCC GGAACCGGAA ATCCGCCCGG AAGACGCCAA GAAGGTTCGC CCGGACTGCA TCATCGCGAC TGGCCGTTCG GACTATCCGA ACCAGGTCAA CAACGTGCTG TGCTTCCCGT TCATCTTCCG TGGCGCGCTG GATGTCGGCG CGACCACGAT CACGGAAGAA ATGAAGCTTG CTTGCGTGCG CGCCATCGCC GAGCTGGCTG AAGAAACCGA TCAGGGCGAC GAAGTCGCGA AGGCTTACGA AGGCCACTCG CTGGAATTCG GTCCCGAGTA TCTGATTCCG AAGCCGTTCG ATCCGCGTCT GATCATCAAG ATCGCGCCGG CCGTCGCGCA AGCCGCGATG GATTCCGGCG TGGCGACCCG TCCGATCAAG GACATGGACG CGTACCGCGA AGAACTCGGC ACGACGGTGT ATCGCACGGG CATGGTGATG CGTCCGGTGT TCGCGGCCGC GAAGTCGGAG CCGGCGCGTA TCGTGTTCGC CGAAGGTGAA GACGAGCGCG TGCTGCGCGC CGCGCAATTC GTGCTGCTGG AAAAGATCGC CAAGCCGATT CTGGTCGGCC GTCCGTCGGT GATCGAGATG CGTCTGAAAA AGATGGGCTC GAAACTCAAG TGCGGCGACG ACTTCGAGAT CGTCGATCCG GAAGACGATC CGCGCTATCA GCAATCCTGG CAGGCGTACC ACGAACTTGG CGCGCGCGAA GGCGTGACGC CGGACGTGGC GAAGGCCGCG ATGCGCAAGT TCAACACGCT GATCGGCGCG ATCCTCGTGC GCCTCGGCGA AGCGGACGGC ATGATCTGCG GCATGATCGG CCAGTACCAC GCGCATCTGA AGTTCATCGA GCAGGTGCTG GGCAAGGCGG ACAATGTGCA GAACTTCGCT GCCATGAATC TGCTGATGCT GCCGGGCCGC AATCTGTTCA TCTGCGATAC GTACGTGAAC GAAACGCCGA CCGCCGAGCA ACTCGCCGAT ATGACGATGC TGGCGGCTGG TGAGATTGAG AAGTTCGGTA TCACGCCGAA GGTGGCGTTG CTGTCGAACT CGAACTTCGG CAGCGCGCCG TCCTCGTCGT CGCAACGCAT GGCAGCGGCT CGCAAGCTGA TTGTCGAACG TGCGCCCTCG CTCGAGATCG ACGGTGAGAT GCATGGCGAC GCCGCGCTGT CGGAAGTGGT GCGCAAGGCT GCGTTCCCGG GCACGACGCT GACCGGCGAA GCCAACCTGC TGATTATGCC GAACGTGGAA GCGGCAAACA TCACGTACAA CCTGCTGAAG ATGATCGGCG GCGAAGGCGT GACGGTCGGT CCGTTCCTGC TGGGCGCCGA AAAGCCGGTG CACATCCTGA CGCCGGCTGC GACCGTGCGC CGGATCATCA ACATGACGGC AGTGGCTTCG GCCAACGCAC GCAAGGCAGT GAACGCGAAG TAA
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Protein sequence | MDEQLKQSAL AYHQNPKPGK ISVTPTKPLS NQLDLSLAYS PGVAAACMAI YDEPLDAQKY TSRGNLVGVI TNGTAVLGLG NIGPLAAKPV MEGKGCLFKK FAGIDVFDIE LAESDPDKLV EAIAMLEPTL GGINLEDIKA PECFYIEKKL RERMKIPVFH DDQHGTAIIA SAAILNGLKV VGKKLDEVKL VCSGAGAAAI ACLDLLVNLG LSKKNVLVTD SKGVIYEGRG NLDPSKERYA ANTEARTLAD AIRGADVFLG CSSAGVLKPE MVAEMGTQPL ILALANPEPE IRPEDAKKVR PDCIIATGRS DYPNQVNNVL CFPFIFRGAL DVGATTITEE MKLACVRAIA ELAEETDQGD EVAKAYEGHS LEFGPEYLIP KPFDPRLIIK IAPAVAQAAM DSGVATRPIK DMDAYREELG TTVYRTGMVM RPVFAAAKSE PARIVFAEGE DERVLRAAQF VLLEKIAKPI LVGRPSVIEM RLKKMGSKLK CGDDFEIVDP EDDPRYQQSW QAYHELGARE GVTPDVAKAA MRKFNTLIGA ILVRLGEADG MICGMIGQYH AHLKFIEQVL GKADNVQNFA AMNLLMLPGR NLFICDTYVN ETPTAEQLAD MTMLAAGEIE KFGITPKVAL LSNSNFGSAP SSSSQRMAAA RKLIVERAPS LEIDGEMHGD AALSEVVRKA AFPGTTLTGE ANLLIMPNVE AANITYNLLK MIGGEGVTVG PFLLGAEKPV HILTPAATVR RIINMTAVAS ANARKAVNAK
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