| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3643 |
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| Symbol | rplD |
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| ID | 6284383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4073555 |
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| End bp | 4074175 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642623223 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_001897257 |
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| Protein GI | 187925615 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000153267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000000211598 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAACTTA AGCTCCTGAA TGCCAATGGT CAGGAAGGTG CGGGCGTTAG CGCGTCGGAC
GTCGTGTTCG GCCGCGATTA CAACGAAGCC CTGATTCACC AGGTGGTGGT CGCGTATCAA
GCGAATGCCC GTAGCGGCAA CCGCGCGCAG AAGGACCGTG AGCAAGTCAA GCACACGACC
AAGAAGCCGT GGCGCCAGAA AGGTACGGGC CGCGCCCGTG CCGGTATGTC GTCGAGCCCG
CTGTGGCGCG GCGGTGGCCG GATCTTCCCG AATTCGCCGG AAGAAAACTT TTCGCACAAG
GTCAACAAGA AGATGCATCG CGCAGGTCTC TGCTCGATCT TCTCGCAGCT GGCCCGCGAA
GGCCGCATCT CGGTGGTTGA CGAGCTGACG CTCGAAGCGC CGAAGACGAA GCTGCTGGCC
GAAAAATTCA AGGCGATGGG TCTCGACTCC GTGCTGGTGA TTACCGACAC GGTTGACGAA
AACCTGTACC TCGCGTCGCG CAACCTGGCC CATGTGGCAG TTGTCGAGCC GCGTTACGCC
GACCCGCTGT CGCTGATCTA CTTCAAGAAG ATCCTGATCA CGAAGGCTGC GGTCGCCCAG
ATCGAGGAGT TGCTGTCATG A
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| Protein sequence | MELKLLNANG QEGAGVSASD VVFGRDYNEA LIHQVVVAYQ ANARSGNRAQ KDREQVKHTT
KKPWRQKGTG RARAGMSSSP LWRGGGRIFP NSPEENFSHK VNKKMHRAGL CSIFSQLARE
GRISVVDELT LEAPKTKLLA EKFKAMGLDS VLVITDTVDE NLYLASRNLA HVAVVEPRYA
DPLSLIYFKK ILITKAAVAQ IEELLS
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