| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3618 |
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| Symbol | |
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| ID | 6284334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4061233 |
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| End bp | 4062210 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642623198 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_001897232 |
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| Protein GI | 187925590 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00450221 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000000103465 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAACCA GTTTGTTGAA GCCCAAGATC ATCGCTGTTG AATCGCTTGG TGAGAGCCAT
GCGAAAGTGG TCATGGAACC GTTTGAACGC GGTTACGGCC ACACCTTGGG TAACGCGCTC
CGGCGCGTGC TGCTGTCGTC GATGATCGGC TATGCGCCGA CCGAGGTGAC GATCGCAGGC
GTCGTGCATG AGTATTCGAC GCTCGACGGT GTGCAAGAGG ATGTGGTCAA CCTGTTGTTG
AACCTGAAGG GCGTGGTGTT CAAGCTGCAC AACCGTGACG AAGTGACGGT TACGCTGCGC
AAGGAAGGCG AAGGCGTTGT CACCGCTGGC GACATTGAAC TCGCGCATGA TTGTGAAGTG
ATCAACCCGG ATCACGTGAT TGCGCATCTG TCGAAGGGCG GCAAGCTCGA CGTGCAGATC
AAGGTCGAAA AGGGCCGCGG CTACGTGCCG GGCAATGTGC GTCGTTATGG CGAAGAGTCG
GCCAAGATCA TCGGCCGTAT CGTGCTGGAC GCGTCGTTCT CGCCGGTTCG CCGCGTGAGC
TACGCCGTTG AAAGCGCTCG CGTCGAACAG CGTACCGACC TCGACAAGCT CGTGATGAAC
ATCGAAACCA ACGGTGTGAT TTCGCCGGAA GAAGCGATCC GCCAGTCGGC GCGCATTCTG
GTCGATCAAC TGTCGGTCTT CGCTGCACTG GAAGGCACCG AAGCAACGGC TGAAGCGCCG
TCGCGTGCGC CGCAGATCGA TCCGATCCTG CTGCGTCCGG TCGATGATCT CGAACTGACG
GTTCGTTCCG CGAACTGCCT GAAGGCCGAG AACATCTACT ACATCGGCGA CCTGATCCAG
CGCACGGAAA ACGAGTTGCT GAAGACGCCG AATCTGGGCC GCAAGTCGCT GAACGAAATC
AAGGAAGTAC TGGCGTCGCG TGGTTTGACG CTCGGCATGA AACTCGAAAA CTGGCCGCCG
GCAGGGTTGG ACAAGTAA
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| Protein sequence | MQTSLLKPKI IAVESLGESH AKVVMEPFER GYGHTLGNAL RRVLLSSMIG YAPTEVTIAG
VVHEYSTLDG VQEDVVNLLL NLKGVVFKLH NRDEVTVTLR KEGEGVVTAG DIELAHDCEV
INPDHVIAHL SKGGKLDVQI KVEKGRGYVP GNVRRYGEES AKIIGRIVLD ASFSPVRRVS
YAVESARVEQ RTDLDKLVMN IETNGVISPE EAIRQSARIL VDQLSVFAAL EGTEATAEAP
SRAPQIDPIL LRPVDDLELT VRSANCLKAE NIYYIGDLIQ RTENELLKTP NLGRKSLNEI
KEVLASRGLT LGMKLENWPP AGLDK
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