| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3581 |
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| Symbol | |
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| ID | 6281498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4019780 |
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| End bp | 4020451 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642623161 |
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| Product | flagellar L-ring protein |
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| Protein accession | YP_001897195 |
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| Protein GI | 187925553 |
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| COG category | [N] Cell motility |
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| COG ID | [COG2063] Flagellar basal body L-ring protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0077729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00000182605 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACTGTGC TACGTCTGAC TGTCGCGCTC GGCGCGGCGG CTTACCTCGC GGCTTGCGCG
AGCCACCAGC AAAACTCGAT CGTCGATACG CCGATGGCGC CGCCGCTCGC CTCGGCTCCG
CTGAACGTCA ACACGCAAGG CGCGATCTAT CAAGCCGGCA CGCCGCTGCT GCTGTACGAA
ACACCGCGCG CCCAACATAT CGGCGACGTG CTGACGATCC GTCTTTCGGA ATCGTACAGC
GGCAACAACA GCGCGACGGC GGCGGCGAGC CGCTCGAGCA GCATCACCGC CGACGCCGCC
GATCATTCCA CCAACGCCGC CGCGCGGCTC GCGCGATTGT TCAATATCGG CTCGGCGAGC
ACCGAATACA AAGGGCAGGG CAGTCTCACC GATGTCAGCG GCATGAACGG CACGCTCGCC
GTCACCGTGA TCGGCACGAT GTCGACGGGC AATCTCGTGG TGTCGGGCGA GAAGGTGATT
GCGATGAGCG GCAACCGCGA CCGGCTGCGC CTGTCAGGCA TCGTCAATCC TAAGGATATC
GAAGCGGGAA ACTACGTGGC GTCGAGCAAG GTGGCGAACG CGCGTATCGA GCAGGCCGGC
GTGGGCATGG TGTCCGACTC CACGACGATG GGCTGGCTGC AGAGAATGTT CATGAGCGTG
CTGACGTTCT GA
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| Protein sequence | MTVLRLTVAL GAAAYLAACA SHQQNSIVDT PMAPPLASAP LNVNTQGAIY QAGTPLLLYE
TPRAQHIGDV LTIRLSESYS GNNSATAAAS RSSSITADAA DHSTNAAARL ARLFNIGSAS
TEYKGQGSLT DVSGMNGTLA VTVIGTMSTG NLVVSGEKVI AMSGNRDRLR LSGIVNPKDI
EAGNYVASSK VANARIEQAG VGMVSDSTTM GWLQRMFMSV LTF
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