| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3572 |
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| Symbol | |
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| ID | 6281078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4010704 |
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| End bp | 4011807 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642623152 |
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| Product | thiamine-phosphate pyrophosphorylase |
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| Protein accession | YP_001897186 |
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| Protein GI | 187925544 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.480222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0000254394 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGCAGA CTTTGACATT GAAAGACCGC GACCTTTTCT GGCCGCCTGC CGACGAACTC
ACCGAAGCCG CCGAGCGCAT CCGCGCCCGG CTCGGCGACT GGCCGCCGAC GCACGCGCCG
TGGCGCATCT GCCTGACCGC GCCGGACGAG CCGAACGGCG GCGATCTGAT CGTGATCGCC
GACGCGCAGC AGCATGGCGA GCAGGTGGCG CGCTGGCTGG TACGGGGCGC CGGCGTGATC
GAAGCCGCCG AGGACAAGGC CACGCTGCAT CTGGGCGGCG AAAAATACCG TCTCGAAGGC
CATCTGGCGG AAGACTGGGT TGCCGCGCTG GCGGCGTTCC TCGACTGCGG TTTCGACCCG
CATGACGCGC TGGTGCTGGC GCTGGCCTGG CGCGACGGCG ACGAAACCCG TGCCGACGAC
GCTTTTCCCG CCGATCTCAG CCATTTCCCG CGACTCGCCG GCTTGCCCGA CGCGCTGGCG
CAGGCGTTCC CGCGCTGCCC GGACCGGTTG GGGCTTTATC CGGTTCTGCC GACGGCGGAG
TGGGTCGAAC GCGTAGTGGG CTTCGGCGTG AAGACGGTGC AGTTGCGCCG CAAATCATCC
GAACCCGCCG AAGAGCTGAA GCGTGAAATT GCCCGCTGCG TGGCCGTCGG CCGTCAGCAC
GACGCTCAGG TGTTCATCAA CGACCATTGG CAGGCCGCGC TCGAGGCGGG CGCATACGGC
GTCCATCTGG GTCAGGAAGA CGTGCATACG GCGGATCTCG CCGCGCTCGC CGCGGGCGGC
GTCAGGCTCG GCCTGTCGAC TCACGGTTTC TACGAGATTC TGCGAGCACT GCATTTCCGG
CCAAGCTACA TTGCTCTGGG TGCGGTGTTT CCCACCACCA CCAAGGTCAT GCCGACCGCG
CCGCAGGGTC TACGGCGTCT AGCCCGTTAC GTGCGGCTGC TCGACGGCGT CGTGCCGCTG
GTGGCGATCG GCGGAATCGA CCTGCAGGTG TTGCCCGACG TGCTGGCGAC GGGTGTCGGT
TGCGCGGCCG TGGTGCGGGC GGTAACGGAA GCGGCGGATC CGGCTGCCGC CGTTTCTGCA
TTGCAACAAG GGTTTACGCG ATAA
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| Protein sequence | MTQTLTLKDR DLFWPPADEL TEAAERIRAR LGDWPPTHAP WRICLTAPDE PNGGDLIVIA
DAQQHGEQVA RWLVRGAGVI EAAEDKATLH LGGEKYRLEG HLAEDWVAAL AAFLDCGFDP
HDALVLALAW RDGDETRADD AFPADLSHFP RLAGLPDALA QAFPRCPDRL GLYPVLPTAE
WVERVVGFGV KTVQLRRKSS EPAEELKREI ARCVAVGRQH DAQVFINDHW QAALEAGAYG
VHLGQEDVHT ADLAALAAGG VRLGLSTHGF YEILRALHFR PSYIALGAVF PTTTKVMPTA
PQGLRRLARY VRLLDGVVPL VAIGGIDLQV LPDVLATGVG CAAVVRAVTE AADPAAAVSA
LQQGFTR
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