Gene Bphyt_3558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3558 
SymbolhisB 
ID6282199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3998800 
End bp3999387 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content60% 
IMG OID642623138 
Productimidazoleglycerol-phosphate dehydratase 
Protein accessionYP_001897172 
Protein GI187925530 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0131] Imidazoleglycerol-phosphate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.451024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0000499164 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCCTTG CGGAAGTCGT TCGCAACACC AGCGAAACGC AGATCCGTGT GAAGATCAAT 
CTGGACGGCA CCGGTCAGCA AAAGCTGGCC ACCGGCGTGC CGTTTCTGGA CCACATGCTC
GACCAGATCG CGCGGCATGG ATTGTTCGAC CTCGAAATCG AAGCGCATGG CGACCTGCAT
ATCGACGACC ATCACACGGT CGAAGACACC GGTATCACGC TCGGCCAGGC CGTCGCGAAA
GCGATCGGCG ACCGTAAGGG CATCGTCCGC TACGGTCATT CCTACGTGCC GCTCGACGAA
GCGTTGTCGC GCGTCGTGAT CGATTTCTCG GGCCGTCCGG GTCTCGAATT CCATGTGCCG
TTCACGCGTG CGCGCATCGG TACGTTCGAC GTCGATCTGT CCATCGAGTT TTTCCGCGGT
TTCGTGAATC ATGCCGGCGT CACTTTGCAT ATCGACAACC TGCGCGGCCT GAACGCCCAC
CATCAGATGG AAACGGTGTT CAAGGCGTTC GGGCGTGCGT TGCGCATGGC CACCGAACTG
GACGAACGTG CGGCGGGACA GATTCCGTCG ACCAAGGGCA GCCTTTAA
 
Protein sequence
MRLAEVVRNT SETQIRVKIN LDGTGQQKLA TGVPFLDHML DQIARHGLFD LEIEAHGDLH 
IDDHHTVEDT GITLGQAVAK AIGDRKGIVR YGHSYVPLDE ALSRVVIDFS GRPGLEFHVP
FTRARIGTFD VDLSIEFFRG FVNHAGVTLH IDNLRGLNAH HQMETVFKAF GRALRMATEL
DERAAGQIPS TKGSL