| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3547 |
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| Symbol | |
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| ID | 6283804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3991879 |
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| End bp | 3992658 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642623127 |
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| Product | Sec-independent protein translocase, TatC subunit |
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| Protein accession | YP_001897161 |
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| Protein GI | 187925519 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.146328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0021948 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGCGACC CCCAGCAAAC CCAGGACGAA GGCACTGAAG AGACCTTCAT TTCCCACCTC
GTTGAATTGC GCGACCGTAT CATTCGCGCC GGCCTTGCCG TCGTCGTGGT GTTCGTCGGA
CTCGTGTATT GGGCGCCGGA TATCTTCCGG TTGCTGGCGC GGCCTTTGAT GCAGAACCTG
CCGAAGGACG GCAAGATGAT CGTCACCGAC GTCACCGGCT CGTTCTTCGT GCCGATGAAG
GTGACTATGC TGGTGGCCTT CGTGATCGCG CTGCCGATCG TGCTTTACCA GATCTGGGCG
TTCGTCGCGC CGGGTCTTTA CCAGCACGAG AAGAAACTGG TCGGGCCGCT GGTGGGCAGC
AGCTACACGC TGTTCCTGTG CGGCATGGCG TTCGCGTATT TCGTGGTGTT CCCGACCATT
TTCCGCGTGA TGGCGCACTA CAACGCGCCG CTCGGCGCGG AGATGACCAC GGACATCGAC
AATTACCTGA GCTTCGTGCT GACCATGTTC ATTGCGTTCG GCGTGACGTT CGAGGTGCCG
ATCGTCGTGG TGCTGCTGGT GCGCATGAAC GTGGTGACGC TCAAGAAGCT CAAGGAGATT
CGTCCGTATG TGATCGTCGG CGCGTTTGTG ATTTCCGCCG TGGTCACGCC GCCGGACGTG
TTCTCGCAGC TGATTCTGGC GATTCCGCTG ATCGTGCTGT ACGAGGCGGG GATCATTGCG
GCGCGGTTGA TCGTCGGCAA GCAGCCGGTG GTGATCGAAG ACGCGAGCCC GTCGGAATGA
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| Protein sequence | MSDPQQTQDE GTEETFISHL VELRDRIIRA GLAVVVVFVG LVYWAPDIFR LLARPLMQNL
PKDGKMIVTD VTGSFFVPMK VTMLVAFVIA LPIVLYQIWA FVAPGLYQHE KKLVGPLVGS
SYTLFLCGMA FAYFVVFPTI FRVMAHYNAP LGAEMTTDID NYLSFVLTMF IAFGVTFEVP
IVVVLLVRMN VVTLKKLKEI RPYVIVGAFV ISAVVTPPDV FSQLILAIPL IVLYEAGIIA
ARLIVGKQPV VIEDASPSE
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