Gene Bphyt_3504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3504 
Symbol 
ID6284489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3948826 
End bp3949551 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content64% 
IMG OID642623083 
Productputative thiol-disulfide interchange protein, DsbC 
Protein accessionYP_001897118 
Protein GI187925476 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.478883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0108218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA CTTTCCGCAT GGCAGCCGCC GTGCTTGCCA TCGCCGCCGT CACGATCGGC 
TGCTCCGCGC AGGCCGACCA GACCACCGAC AAGCTCAAGG CCACGCTGCA AACGCGGCTC
GCCGACGTGT CGATCAAGAG CGTGACGAAG TCGCCGATTG CCGGCCTGTA CGAAGTGAAC
CTCGGCACGC AGATCGTCTA TAGCGACGCG AATGGCGACT ACCTGTTGCT CGGCGACATG
GTCGACGCCA AGACCCGCAA GAATCTGACC GAAGCGCGCC TGTCGGAAAC CAACCGTATC
GATTTCGCGA GCCTGCCGTT CGGCAACGCG GTGAAGGTCG TGAAGGGCAA CGGCGCGCGC
AAGATCGCCG TGTTCTCCGA TCCGAACTGT CCGTACTGCA AGCAGCTCGA AACGTCGCTC
AAGTCGATCG ACAATGTGAC GGTCTACACC TTCCTGTACC CGGTGTTGTC GCCGGATTCG
ACTGCCAAGT CGAAGTCGAT CTGGTGCTCG ACGGATCGCG CGAAGGCCTG GGAGTCGTGG
ATGCAGGATC ACCAGGCGCC CACCGCCGCC GGCACCTGCG ACACCGCCGC GATCGACAAG
AACCTCGCGC TCGGCCACGC CATGAACGTC GACGGCACGC CCACGGTGTT TCTCGCCGAC
GGCCGCCGTC TGCCCGGCGC CGTGCCGGCT GACCGGCTGG ACAAGGAAAT GTCCGCGGTG
CACTGA
 
Protein sequence
MKKTFRMAAA VLAIAAVTIG CSAQADQTTD KLKATLQTRL ADVSIKSVTK SPIAGLYEVN 
LGTQIVYSDA NGDYLLLGDM VDAKTRKNLT EARLSETNRI DFASLPFGNA VKVVKGNGAR
KIAVFSDPNC PYCKQLETSL KSIDNVTVYT FLYPVLSPDS TAKSKSIWCS TDRAKAWESW
MQDHQAPTAA GTCDTAAIDK NLALGHAMNV DGTPTVFLAD GRRLPGAVPA DRLDKEMSAV
H