Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3500 |
Symbol | |
ID | 6284485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3944505 |
End bp | 3945131 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642623079 |
Product | adenylate cyclase |
Protein accession | YP_001897114 |
Protein GI | 187925472 |
COG category | [S] Function unknown |
COG ID | [COG3025] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.857741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.000378229 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGCATGG AACGCGAAAT CAAATTGGCG CTGCCGCCCG CGCAGGTGGA AGCGGCGACG CGTTGGTTCG TCGCGCGCAC CGGCGCGCAG GGTCGTCCGA TCAAGCTGGT GAATATTTAC TTCGACACGC CAGCGTTGGC GCTGGCGGGT TCGAAAAGCG CCTTGCGTTT GCGGCAGACG CCGGACGGCT GGCTGCAAAC CTTCAAGACG GTGGGCAACG CCAACAATGG TTTGCACAGC CGGCATGAAT GGGAAATGCC GGTAGCCGGC GAAAAACTGG AGATCGACGC GTTGCTGCGC GACTGCGACG AGCCGTCCGC CGCAGACGCG TTGCGTCAAG CCGCGCCTGA GCTGACAGAA CTGTTCCGCA CGAATTTCAC CCGGACGCTG TGGCATGTCG AAGTAGACGG CTCGGACATC GAAGCGGCCA TCGATCAAGG CGACGTGTTC GCCGAGGTCG ACGGCGAAAC GCGCCGCGCG CCGATCTCGG AAGTCGAGCT CGAACTGAAG TCCGGCGACG AAGCCGCGCT TCACACGCTC GCAGCGGAAC TCGGCAAACA GATACCCGGC CTCGCGCCAG ACAACATCAG CAAGGCGCAG CGAGGTTACA AGTTGCGCGT TGACTGA
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Protein sequence | MGMEREIKLA LPPAQVEAAT RWFVARTGAQ GRPIKLVNIY FDTPALALAG SKSALRLRQT PDGWLQTFKT VGNANNGLHS RHEWEMPVAG EKLEIDALLR DCDEPSAADA LRQAAPELTE LFRTNFTRTL WHVEVDGSDI EAAIDQGDVF AEVDGETRRA PISEVELELK SGDEAALHTL AAELGKQIPG LAPDNISKAQ RGYKLRVD
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