Gene Bphyt_3500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3500 
Symbol 
ID6284485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3944505 
End bp3945131 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content63% 
IMG OID642623079 
Productadenylate cyclase 
Protein accessionYP_001897114 
Protein GI187925472 
COG category[S] Function unknown 
COG ID[COG3025] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.857741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.000378229 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCATGG AACGCGAAAT CAAATTGGCG CTGCCGCCCG CGCAGGTGGA AGCGGCGACG 
CGTTGGTTCG TCGCGCGCAC CGGCGCGCAG GGTCGTCCGA TCAAGCTGGT GAATATTTAC
TTCGACACGC CAGCGTTGGC GCTGGCGGGT TCGAAAAGCG CCTTGCGTTT GCGGCAGACG
CCGGACGGCT GGCTGCAAAC CTTCAAGACG GTGGGCAACG CCAACAATGG TTTGCACAGC
CGGCATGAAT GGGAAATGCC GGTAGCCGGC GAAAAACTGG AGATCGACGC GTTGCTGCGC
GACTGCGACG AGCCGTCCGC CGCAGACGCG TTGCGTCAAG CCGCGCCTGA GCTGACAGAA
CTGTTCCGCA CGAATTTCAC CCGGACGCTG TGGCATGTCG AAGTAGACGG CTCGGACATC
GAAGCGGCCA TCGATCAAGG CGACGTGTTC GCCGAGGTCG ACGGCGAAAC GCGCCGCGCG
CCGATCTCGG AAGTCGAGCT CGAACTGAAG TCCGGCGACG AAGCCGCGCT TCACACGCTC
GCAGCGGAAC TCGGCAAACA GATACCCGGC CTCGCGCCAG ACAACATCAG CAAGGCGCAG
CGAGGTTACA AGTTGCGCGT TGACTGA
 
Protein sequence
MGMEREIKLA LPPAQVEAAT RWFVARTGAQ GRPIKLVNIY FDTPALALAG SKSALRLRQT 
PDGWLQTFKT VGNANNGLHS RHEWEMPVAG EKLEIDALLR DCDEPSAADA LRQAAPELTE
LFRTNFTRTL WHVEVDGSDI EAAIDQGDVF AEVDGETRRA PISEVELELK SGDEAALHTL
AAELGKQIPG LAPDNISKAQ RGYKLRVD