| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3499 |
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| Symbol | trpC |
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| ID | 6284484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3943673 |
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| End bp | 3944458 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642623078 |
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| Product | indole-3-glycerol-phosphate synthase |
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| Protein accession | YP_001897113 |
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| Protein GI | 187925471 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.413739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000209901 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAGCGACA TCCTCGACCG TATCATCGCG GTCAAACGCG AAGAAGTCCG CGCGGCCGAA
CAGAGCGCGC CGCTCGAAGA GCTGCGCCTC GAAGCGTCGT CGCGCGACAT TCGCGACTTC
GTCGGCGCAT TGCGCGCGAA ACACACGGCA GGCCTCGCCG CCGTCATCTC CGAAGTCAAG
AAAGCGAGCC CGTCGAAAGG CGTGTTGCGC GAGCACTTCG TGCCGGCCGA GATCGCGCGT
TCGTACGAAA AGCACGGCGC GGCCTGCCTG TCCGTGCTCA CCGACGTGCA ATTCTTCCAG
GGCAGTGTCG CGTATCTGGA GGAAGCGCGT GCGGCCTGCA ATTTGCCGGT GCTGCGCAAG
GACTTCATCG TCGACCCGTA CCAGATCGTC GAAGCGCGCG CGATGGGCGC CGACGCGATC
CTGCTGATCG CCGCCGCGCT CGAAACGTCG CAGATGCAGG ACCTGGAAGC GCTCGCGCAT
TCGCTCGGTC TCGCCGTGCT GGTCGAAGTG CACGATCACG ACGAGCTGAT GGAATCGCTC
ACACTGAAAA CGCCGTTGAT CGGCATCAAC AACCGCAATC TGCGCACCTT CGAGACCTCG
ATCGAAACGA CGATCGGCAT GCTCGAAGCG ATTCCGGACG ACCGCATCGT CGTCACGGAG
TCGGGCATTC TGTCGCGCGC CGATGTGGAG CGCCTGCGTG CGATGGACGT GCACACGTTC
CTCGTCGGCG AGGCGTTCAT GCGCGCGAAC GAGCCGGGCG TGGAGCTTGC CCGGATGTTT
TTCTGA
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| Protein sequence | MSDILDRIIA VKREEVRAAE QSAPLEELRL EASSRDIRDF VGALRAKHTA GLAAVISEVK
KASPSKGVLR EHFVPAEIAR SYEKHGAACL SVLTDVQFFQ GSVAYLEEAR AACNLPVLRK
DFIVDPYQIV EARAMGADAI LLIAAALETS QMQDLEALAH SLGLAVLVEV HDHDELMESL
TLKTPLIGIN NRNLRTFETS IETTIGMLEA IPDDRIVVTE SGILSRADVE RLRAMDVHTF
LVGEAFMRAN EPGVELARMF F
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