Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3498 |
Symbol | trpD |
ID | 6283321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3942593 |
End bp | 3943642 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642623077 |
Product | anthranilate phosphoribosyltransferase |
Protein accession | YP_001897112 |
Protein GI | 187925470 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.432784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.000262957 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGAGAG ACGACATCAT GACGATTACG CCCCAGGAAG CGCTGCAACG GACCATCGAG CACCGCGAGA TTTTCCACGA CGAAATGCTG CATTTGATGC GGCTCATCAT GCGCGGCGAA CTCTCGCCCG TGATGGCGGC CGCGATCATC ACCGGCTTGC GTGTCAAAAA AGAGACCATC GGCGAAATCA CCGCCGCCGC CACGGTGATG CGCGAGTTTG CCCGGCACGT CGAGGTGCAG GACAACTCGA ACTTCGTCGA TATCGTCGGC ACCGGCGGCG ACGGCTCGCA CACCTTCAAC ATTTCCACGG CAACCATGTT CGTTTCGGCC GCGGCCGGCG CCAAGGTCGC GAAACACGGT GGCCGCGGCG TATCGAGCAA GTCGGGCAGC GCGGACGTGC TCGAAGCGCT CGGCGTGAAT ATCGATCTGC AGCCGGAACA GGTGGCGGCG TCGATTGCGG AAACCGGCAT GGGCTTCATG TTCGCGCCGA ACCATCATCC GGCCATGAAG AACATTGCGC CGGTTCGCCG CGAACTCGGC GTGCGGACCA TCTTCAATAT TCTCGGGCCG CTGACCAATC CGGCCGGCGC ACCGAATCAA TTGATGGGCG TGTTCCACGG CGACCTCGTC GGCATTCAGG TGCGCGTGAT GCAACGTCTC GGCGCGAAGC ACGTGCTAGT GGTGTACGGT ATGGACGGCA TGGACGAAGT CTCGCTCGGC GCGGCGACGC AGGTCGGCGA GTTGCGCGAC GGCCAGATCC ACGAGTACGA GATTCATCCG GAAGACTTCG GCATGCAGAT GGTGTCGAAC CGCACGCTGA AAGTGGCCGA CGCCACCGAA TCCAAAGCGA TGCTGCTCGA CGCGCTCGAC AACAAGCCTG GCGTCGCCCG CGAAATCGTC ACGCTGAACG CGGGCACCGC CTTGTATTCG GCGAACGTGG CTTCGTCGAT CGCGGACGGC ATTCAGTTGG CGCGCGAAGC GATCGCGAGC GGCAAGGCAC GAGCCAAGGT GGACGAACTC GTTCGCTTTA CCCAGCAATT CAAGCACTGA
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Protein sequence | MKRDDIMTIT PQEALQRTIE HREIFHDEML HLMRLIMRGE LSPVMAAAII TGLRVKKETI GEITAAATVM REFARHVEVQ DNSNFVDIVG TGGDGSHTFN ISTATMFVSA AAGAKVAKHG GRGVSSKSGS ADVLEALGVN IDLQPEQVAA SIAETGMGFM FAPNHHPAMK NIAPVRRELG VRTIFNILGP LTNPAGAPNQ LMGVFHGDLV GIQVRVMQRL GAKHVLVVYG MDGMDEVSLG AATQVGELRD GQIHEYEIHP EDFGMQMVSN RTLKVADATE SKAMLLDALD NKPGVAREIV TLNAGTALYS ANVASSIADG IQLAREAIAS GKARAKVDEL VRFTQQFKH
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