Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3464 |
Symbol | |
ID | 6280855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3897510 |
End bp | 3898013 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642623038 |
Product | Redoxin domain protein |
Protein accession | YP_001897078 |
Protein GI | 187925436 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0678] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00011215 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.000691326 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTCAGG CAGGTGACAA GCTGCCCGAC GCGACGCTCT TCGAGTTGAT CGAAGACGAG CGGGCGGGCT GCACGATCGG GCCTAACAGC TTCGACGTGC GCGAGCAGAC GGCGGGCAAG CGTGTGGTGA TCTTCGGATT GCCCGGCGCG TTCACGCCCA CCTGTTCGGC CAAACATGTA CCGGGTTATG TCGAGCACGC CGAGCAGTTG CGCGCTCTTG GCATCGACGA GATCTGGTGC GTGTCCGTCA ACGACGCGTT CGTAATGGGC GCGTGGGGAC GCGATCAGCA CGCCTCGGGC AAGGTGCGCA TGATGGCGGA CGGCAGTGCG GCTTTCACGC GAGCGCTCGG TCTCGAGCAG GATTTGTCGG CGCGCGGCAT GGGAATCCGT TCCCAACGCT ACGCGATGGT GGTCGACGAC GGCGTGGTCA AGACGTTGAA CGTCGAGGCT GCCGGCAAAT TCGAAGTCAG CGATGCAGGG AGTATTCTCG CTACGTTGAG CTAG
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Protein sequence | MIQAGDKLPD ATLFELIEDE RAGCTIGPNS FDVREQTAGK RVVIFGLPGA FTPTCSAKHV PGYVEHAEQL RALGIDEIWC VSVNDAFVMG AWGRDQHASG KVRMMADGSA AFTRALGLEQ DLSARGMGIR SQRYAMVVDD GVVKTLNVEA AGKFEVSDAG SILATLS
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