| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3452 |
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| Symbol | |
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| ID | 6281922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3884448 |
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| End bp | 3885743 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642623026 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001897066 |
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| Protein GI | 187925424 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.190294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00352779 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAGCAT CTTTCCAACC CGCGGCAGCG TCGCCGCGTC CCATCGCAAG CGCCCACGAA
AGCGCCGTCA GAGCGAAGCT GAAACCATTC GCACCCGACC TCAGCGCAGC AAATCCCGCC
GACACCGACA ACGCTCCCGC CGTGCGTCTC CTGACCGACA CATTGCAGGA AGCAACTCGC
CGAAACGCGT CGGACCTTCA CATCGAGCCA GCGGAACACG GCTGGCGCGT GCGCTTGCGA
ATCGACGGCG TGCTGCACGA AATCCCGCCG CCGCCCGCGC ATCTGCGCGA CGCGTTCATT
ACTCGGGTGA AGGTGCTGGC TCGTATGGAT ATCGCCGAGC GTCGCGTACC GCAAGACGGC
CGGCTGCGCA TTTCCACTTC GCCGGGACGC GTTGAGGACT ACCGCGTGAA CTCGCTGCCC
ACGCTATTCG GAGAAAAGCT CGTGCTGCGC AGACTCGACG CGCTGCCCGC CGATCTTTCA
CTTGACTCGC TCGGCCTCGA TCCGCGACAG CGCCAAACAG TGGACGCCGC GATTCGCGCG
CCGCACGGCC TCATGCTTGT CACCGGCCCG ACCGGGAGCG GCAAGACATT GTCGCTGTAC
TGCTTTCTGA ATCTGCTCAA CGGCGAGGCC CGCAATCTCT GTTCGGTGGA AGATCCCGCG
GAAATCCAGT TGGCGGGCAT CAATCAGGTC AGCGTACGCG AAAAAGCCGG GCTCACTTTC
GCCGTGGCGC TGCGTGCGTT TCTTCGTCAG GATCCCGACG TAATCATGGT CGGCGAAATT
CGCGACGAAG AGACCGCCGA CGTCGCCGTG AAAGCCGCGC AAACGGGCCA CCTCGTGTTG
TCGACCCTGC ATACGAACGA CGCGCCGGCA GCCGTCGCGC GTCTGATCGA CATCGGCGTC
GAGCCGTATA ACCTCGCGGC CGCGTTGCGG ATGGTCACCG CGCAACGGCT GGTGCGGCGG
CTCTGCGCCG CGTGCCGCGT GCCGGCGCCG CAGTCGCTCG CGGCGCTCCG AGCGGCGGGT
TTCAGCGAGC ATCAACTCGA CGGCTGGCAG CCTTACGCCG CCGCCGGATG TGCAGCATGT
CACGGCATCG GCTATCGCGG CCGCGTCGGC GTTCATCAGG TGATGCCCGT CTCCGATGCG
ATGCGAGAGT TGATCGTCGC GAGCGCCGGC ACGCATGAAC TCGCGCGGCT AGCGCAAACC
GAACAGGTGG GCACCTTGCG CGACGCGGCG TTGACGCGTG TGCGCGACGG CACCACCAGC
CTCGCCGAAG CGCTCGCCGC CACCGAGGTC GCATGA
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| Protein sequence | MQASFQPAAA SPRPIASAHE SAVRAKLKPF APDLSAANPA DTDNAPAVRL LTDTLQEATR
RNASDLHIEP AEHGWRVRLR IDGVLHEIPP PPAHLRDAFI TRVKVLARMD IAERRVPQDG
RLRISTSPGR VEDYRVNSLP TLFGEKLVLR RLDALPADLS LDSLGLDPRQ RQTVDAAIRA
PHGLMLVTGP TGSGKTLSLY CFLNLLNGEA RNLCSVEDPA EIQLAGINQV SVREKAGLTF
AVALRAFLRQ DPDVIMVGEI RDEETADVAV KAAQTGHLVL STLHTNDAPA AVARLIDIGV
EPYNLAAALR MVTAQRLVRR LCAACRVPAP QSLAALRAAG FSEHQLDGWQ PYAAAGCAAC
HGIGYRGRVG VHQVMPVSDA MRELIVASAG THELARLAQT EQVGTLRDAA LTRVRDGTTS
LAEALAATEV A
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