Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3448 |
Symbol | rpmA |
ID | 6283954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3880753 |
End bp | 3881016 |
Gene Length | 264 bp |
Protein Length | 87 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642623021 |
Product | 50S ribosomal protein L27 |
Protein accession | YP_001897062 |
Protein GI | 187925420 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0211] Ribosomal protein L27 |
TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0232252 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00744788 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCACACA AAAAGGCAGG CGGATCATCC CGCAACGGCC GCGACTCCGA ATCGAAACGC CTTGGCGTGA AGGTTTACGG CGGTCAGGCT ATCAACGCTG GCGGCATCAT CGTTCGTCAA CGTGGCACGC GTATGCACCC GGGCGAAAAC GTTGGCATCG GCAAGGATCA CACCTTGTTC GCGCTGACGG ACGGCCACGT CAATTTCTCG ACGAAGGGCG CAGCGAAGAA GCACATGGTC AACGTCGTCC CGGCAGCAGT CTGA
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Protein sequence | MAHKKAGGSS RNGRDSESKR LGVKVYGGQA INAGGIIVRQ RGTRMHPGEN VGIGKDHTLF ALTDGHVNFS TKGAAKKHMV NVVPAAV
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