| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3436 |
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| Symbol | |
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| ID | 6282537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3866297 |
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| End bp | 3869302 |
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| Gene Length | 3006 bp |
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| Protein Length | 1001 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642623009 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_001897050 |
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| Protein GI | 187925408 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit
[COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.124151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00141337 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAACCA CCGACAACGT GACGACCCGG TACGAGGGCT CACCGACTGG CCAGGCCTTC
GGCCAGGCAC AAGGCGCACA AGCGCTCGCG CCGCAAGCGA CCTTCGCCGA CTACAAGGTG
ATCCGCCGTA ACGGCAGCGT CGTGTCGTTC GAACCGTCGA AAATCGCCAT CGCCGTGACG
AAGGCATTTC TGGCCGTGAA CGGTGGTCAA GGCGCCGCCT CCGCGCGTGT GCGCGAACTG
GTGGAGCAAC TCACGCAGAA CGTGGTGCGC GCACTCGTGC GCAGCCGCCC GAACGGCGGC
ACGTTCCATA TCGAAGACAT TCAGGATCAG GTCGAACTCG CGCTGATGCG CGGCGGCGAG
CACAACGTCG CGCGTGCCTA CGTGCTGTAT CGCGAGAAGC GCACGCAGGC GCGCGGTCAT
GACGACCAGA TCGTGGCGAA CACGCCGGGT CTGAACGTCA CGGACAACGG TGTCACGCGT
CCGCTGGACA TGGCTGCGCT GCGCGGCATC ATCGAACTGG CTTGCTCGAA TCTGGGCGAC
GCTGTGAGCG CCGATCCGAT CATCGCGGAA ACGGTCAAGA ATCTGTACGA CGGCGTGCCG
ATGAGCCAGG TCTACGACTC GGCGATTCTG GCTGCCCGCA CCATGATCGA AAAGGACCCG
GCGTACAGCC AGGTCACCGC GCGCATCCTG CTGCACACGA TCCGCCGCGA GATCCTCAAA
GAGGAAGTCA CGCAAACGGA AATGGGCGAG CGTTACGCCG AATACTTCCC GCAGTTCATC
AAGCGCGGCG TGCAAGCCGA GCTGCTCGAC GACAAGCTGC TGCAGTTCGA CCTGAAGCGC
CTCGGTGCCG CACTCGACAA CAACCGCGAT CTGCAATTCG GCTACCTCGG TCTGCAGACG
CTGTACGACC GCTACTTCCT GCATCACGAC GGCGTGCGCA TCGAAATGCC GCAGGCATTC
TTTATGCGTG TCGCGATGGG CCTGTCGCTG AACGAGATCG ACCGTGAAGC ACGTGCGATC
GAGTTTTATA ACGTGCTGTC GAGCTTCGAC TTCATGTCGT CCACGCCGAC GCTGTTCAAC
TCGGGCACGC GCCGCTCGCA ACTGTCGTCG TGCTATTTGA CGACGGTGGA CGACGACCTC
GACGGCATCT ATGAAGCGCT GAAGGAAAAC GCGCTGCTGT CGAAGTTCGC CGGCGGTCTG
GGCAACGACT GGACGCGCGT GCGTGCTTTG GGCTCCCACA TCAAGGGCAC TAATGGCAAG
TCGCAAGGCG TCGTGCCGTT CCTGAAGGTC GTCAACGACA CGGCGGTCGC TGTGAACCAG
GGCGGCAAGC GCAAGGGCGC GGTGTGCGCG TACCTGGAAT CGTGGCACCT CGACATCGAA
GAATTCCTCG AGCTGCGTAA GAACACCGGC GACGACCGTC GTCGCACGCA CGACATGAAC
ACGGCGAACT GGATTCCCGA CCTGTTCATG AAGCGCGTGA TGGAAGGCGG CGACTGGACG
CTGTTCTCGC CGTCCACCTG CCCGGATCTG CACGACCTGT TCGGCGCCGA TTTCGAAAAG
GCTTACACGG CTTACGAAGA CAAGGTCGCG CGCGGCGAGA TCAAGCTGTT CAAGAAGATC
CCGGCGGCGC AACTGTGGCG CAAGATGCTG GGCATGCTGT TCGAAACCGG CCACCCGTGG
ATCACGTTCA AGGATCCGTG CAATGTGCGT TCGCCGCAAC AGCACGTCGG CGTCGTCCAC
TCGTCGAACC TCTGCACGGA AATCACGTTG AACACCAGCG ACGCGGAAAT CGCCGTCTGC
AATCTGGGCT CGGTGAACCT CGTCGCTCAC CTGAAGGAAC AGGCCGACGG CACGCTCGTG
CTCGACCACG ACAAGCTCAA GCGCACGGTC AGCGTCGCTA TGCGCATGCT CGACAACGTG
ATCGACATCA ACTACTACGC GGTCGCCAAG GCGCGTAACT CGAACCTGAA GCACCGTCCG
GTCGGCATGG GCATCATGGG CTTCCAGGAC TGCCTGCATC TGCTGCGCAC GCCGTACGCG
TCAGAAGAAG CGGTCAAGTT CGCCGACACG TCCATGGAAG CGGTTTGCTA CTACGCTTAC
TACGCGTCGA CGGAACTGGC GCAGGAACGC GGCCGCTACT CCAGCTACCG CGGTTCGCTG
TGGGATCGCG GCATCCTGCC GCAAGACTCG GTGAAGCTGC TTGCCGACGC GCGCGGCGGT
TACGTCGAAG TCGATTCGAG CGAGTCGATG GACTGGACCG AACTGCGTTC GCGCATCGCC
ACCTACGGCA TGCGCAACTC GAACTGCGTC GCGATCGCGC CGACGGCGAC GATCTCGAAC
ATCATCGGCG TGTCGGCTTG CATCGAACCG ACCTTCCAGA ACCTGTATGT GAAGTCGAAT
CTGTCGGGCG AATTCACGGT GGTCAACGAC TACCTGGTGC GCGACCTGAA GGCACGCGGC
CTGTGGGACG AAGTGATGGT CGCCGACCTG AAGTACTTCG ACGGCACGCT CTCGCGCATC
GACCGCATTC CGGCCGACCT GCGCGCGATC TACGCGACCG CGTTCGAAGT CGATCCGAAG
TGGCTGGTCG AAGCGGCTTC GCGTCGTCAG AAGTGGATCG ACCAGGCGCA GTCGCTGAAC
ATTTACATGG GCGGCGCGTC GGGTAAGAAG CTCGACGAGA TCTACAAGCT CGCATGGGTG
CGCGGCTTGA AGACCACGTA CTACCTCCGC ACGATGGCGG CGACCCACGT CGAGAAATCG
ACGGTGGCGC ACGGCGCGCT GAACGCGGTG AGCTCGGGTG GCGGCGAAGG TTCGGGCGGT
GCTGCGGGTG GCGCGGCCGG TGGCTTTGGT GCGAACAACG GCGCGGCTGG TGGTGCCGCA
GGTGGCTTTC AGGCTGCAGC GGCCACGCCA GCAGTCGCGG TTGAAGCAGC GCCGGAAGCG
GATGGTCCGG TGTGCATGAT GCGTCCGGGC GACCCTGGCT TCGACGAGTG CGAAGCTTGC
CAATAA
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| Protein sequence | MQTTDNVTTR YEGSPTGQAF GQAQGAQALA PQATFADYKV IRRNGSVVSF EPSKIAIAVT
KAFLAVNGGQ GAASARVREL VEQLTQNVVR ALVRSRPNGG TFHIEDIQDQ VELALMRGGE
HNVARAYVLY REKRTQARGH DDQIVANTPG LNVTDNGVTR PLDMAALRGI IELACSNLGD
AVSADPIIAE TVKNLYDGVP MSQVYDSAIL AARTMIEKDP AYSQVTARIL LHTIRREILK
EEVTQTEMGE RYAEYFPQFI KRGVQAELLD DKLLQFDLKR LGAALDNNRD LQFGYLGLQT
LYDRYFLHHD GVRIEMPQAF FMRVAMGLSL NEIDREARAI EFYNVLSSFD FMSSTPTLFN
SGTRRSQLSS CYLTTVDDDL DGIYEALKEN ALLSKFAGGL GNDWTRVRAL GSHIKGTNGK
SQGVVPFLKV VNDTAVAVNQ GGKRKGAVCA YLESWHLDIE EFLELRKNTG DDRRRTHDMN
TANWIPDLFM KRVMEGGDWT LFSPSTCPDL HDLFGADFEK AYTAYEDKVA RGEIKLFKKI
PAAQLWRKML GMLFETGHPW ITFKDPCNVR SPQQHVGVVH SSNLCTEITL NTSDAEIAVC
NLGSVNLVAH LKEQADGTLV LDHDKLKRTV SVAMRMLDNV IDINYYAVAK ARNSNLKHRP
VGMGIMGFQD CLHLLRTPYA SEEAVKFADT SMEAVCYYAY YASTELAQER GRYSSYRGSL
WDRGILPQDS VKLLADARGG YVEVDSSESM DWTELRSRIA TYGMRNSNCV AIAPTATISN
IIGVSACIEP TFQNLYVKSN LSGEFTVVND YLVRDLKARG LWDEVMVADL KYFDGTLSRI
DRIPADLRAI YATAFEVDPK WLVEAASRRQ KWIDQAQSLN IYMGGASGKK LDEIYKLAWV
RGLKTTYYLR TMAATHVEKS TVAHGALNAV SSGGGEGSGG AAGGAAGGFG ANNGAAGGAA
GGFQAAAATP AVAVEAAPEA DGPVCMMRPG DPGFDECEAC Q
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